The 2.0 version of rSNPBase

Variant report

Variant rs657166
Chromosome Location chr1:47127764-47127765
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47088200-47131600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:47101600-47130000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:47101600-47133000 Weak transcription H9 Cell Line embryonic stem cell
4 chr1:47103000-47132800 Weak transcription Spleen Spleen
5 chr1:47105000-47132800 Weak transcription Stomach Mucosa stomach
6 chr1:47109400-47129800 Weak transcription Pancreas Pancrea
7 chr1:47109400-47132600 Weak transcription Hela-S3 cervix
8 chr1:47109600-47132600 Weak transcription HMEC breast
9 chr1:47115600-47133000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:47115800-47132000 Weak transcription Fetal Heart heart
11 chr1:47116000-47130000 Weak transcription Lung lung
12 chr1:47116000-47130600 Weak transcription Esophagus oesophagus
13 chr1:47116000-47131800 Weak transcription Aorta Aorta
14 chr1:47116600-47130000 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr1:47116600-47131400 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr1:47118000-47132800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr1:47118200-47130000 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr1:47119000-47132400 Weak transcription A549 lung
19 chr1:47119200-47132400 Weak transcription Small Intestine intestine
20 chr1:47121000-47129400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr1:47121000-47133000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:47122000-47129800 Weak transcription Colonic Mucosa Colon
23 chr1:47122000-47130000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:47122200-47130000 Weak transcription NHEK skin
25 chr1:47122200-47131000 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr1:47122400-47132000 Weak transcription Placenta Amnion Placenta Amnion
27 chr1:47122600-47132200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr1:47122600-47133000 Weak transcription Gastric stomach
29 chr1:47122800-47129200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:47122800-47129400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:47122800-47129400 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:47122800-47130000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr1:47122800-47130000 Weak transcription Brain Germinal Matrix brain
34 chr1:47122800-47130000 Weak transcription Rectal Smooth Muscle rectum
35 chr1:47122800-47132000 Weak transcription NHLF lung
36 chr1:47122800-47132200 Weak transcription ES-I3 Cell Line embryonic stem cell
37 chr1:47123000-47129800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
38 chr1:47123600-47129400 Weak transcription Fetal Brain Female brain
39 chr1:47123600-47129800 Weak transcription NHDF-Ad bronchial
40 chr1:47123600-47131400 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr1:47123600-47132600 Weak transcription HUVEC blood vessel
42 chr1:47123600-47133000 Weak transcription HSMMtube muscle
43 chr1:47123800-47129400 Weak transcription Muscle Satellite Cultured Cells --
44 chr1:47123800-47129800 Weak transcription K562 blood
45 chr1:47123800-47130000 Weak transcription Brain Inferior Temporal Lobe brain
46 chr1:47123800-47130000 Weak transcription Brain Substantia Nigra brain
47 chr1:47124000-47129400 Weak transcription iPS-18 Cell Line embryonic stem cell
48 chr1:47124200-47129200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr1:47124200-47129400 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr1:47124200-47129400 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015