The 2.0 version of rSNPBase

Variant report

Variant rs72900715
Chromosome Location chr1:47169276-47169277
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47141400-47183400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:47143800-47171600 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr1:47154600-47183400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:47157600-47172200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr1:47158200-47172000 Weak transcription Brain Angular Gyrus brain
6 chr1:47158800-47171000 Weak transcription ES-I3 Cell Line embryonic stem cell
7 chr1:47159200-47182800 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr1:47159400-47171200 Weak transcription Right Ventricle heart
9 chr1:47159400-47172200 Weak transcription Psoas Muscle Psoas
10 chr1:47160600-47169400 Strong transcription Primary T regulatory cells fromperipheralblood blood
11 chr1:47160600-47173600 Strong transcription Primary T cells from cord blood blood
12 chr1:47160600-47174000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
13 chr1:47160600-47181200 Strong transcription Dnd41 blood
14 chr1:47160800-47174000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
15 chr1:47160800-47175400 Strong transcription Liver Liver
16 chr1:47160800-47181800 Strong transcription Breast Myoepithelial Primary Cells Breast
17 chr1:47160800-47182200 Strong transcription Primary B cells from cord blood blood
18 chr1:47160800-47182200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:47160800-47182400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:47160800-47182600 Strong transcription Placenta Placenta
21 chr1:47161000-47173400 Strong transcription Primary hematopoietic stem cells blood
22 chr1:47161000-47173800 Strong transcription Sigmoid Colon Sigmoid Colon
23 chr1:47161200-47182200 Strong transcription Primary B cells from peripheral blood blood
24 chr1:47161400-47182200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr1:47161400-47182800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
26 chr1:47161600-47170800 Weak transcription iPS-15b Cell Line embryonic stem cell
27 chr1:47161800-47169800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:47161800-47170600 Weak transcription Fetal Intestine Small intestine
29 chr1:47162000-47169800 Weak transcription Placenta Amnion Placenta Amnion
30 chr1:47162200-47170000 Weak transcription Primary T killer naive cells fromperipheralblood blood
31 chr1:47162200-47170200 Weak transcription Small Intestine intestine
32 chr1:47162400-47169800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr1:47162400-47170200 Weak transcription Brain Cingulate Gyrus brain
34 chr1:47162400-47170600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr1:47162400-47170800 Weak transcription Fetal Brain Male brain
36 chr1:47162400-47171000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr1:47162600-47170800 Weak transcription HSMMtube muscle
38 chr1:47162800-47169600 Weak transcription Hela-S3 cervix
39 chr1:47162800-47170000 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:47162800-47170200 Weak transcription Primary T killer memory cells from peripheral blood blood
41 chr1:47162800-47170200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
42 chr1:47162800-47170600 Weak transcription HepG2 liver
43 chr1:47164000-47169800 Weak transcription Fetal Stomach stomach
44 chr1:47164000-47170800 Weak transcription Lung lung
45 chr1:47164200-47173600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr1:47164200-47177400 Strong transcription GM12878-XiMat blood
47 chr1:47164400-47182200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr1:47164400-47182800 Strong transcription HUES48 Cell Line embryonic stem cell
49 chr1:47164600-47173400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
50 chr1:47164600-47181600 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015