Variant report

Variant rs56806297
Chromosome Location chr6:143827471-143827472
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143772600-143832000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr6:143773400-143832000 Weak transcription Fetal Brain Male brain
3 chr6:143781000-143832000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
4 chr6:143790200-143831600 Weak transcription Esophagus oesophagus
5 chr6:143790200-143831600 Weak transcription Gastric stomach
6 chr6:143795800-143831800 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr6:143797600-143831000 Weak transcription Skeletal Muscle Male skeletal muscle
8 chr6:143800800-143831000 Weak transcription Colon Smooth Muscle Colon
9 chr6:143805200-143827800 Weak transcription Fetal Heart heart
10 chr6:143811400-143832000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr6:143811800-143829400 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr6:143812200-143831600 Weak transcription Right Ventricle heart
13 chr6:143812400-143829600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr6:143812400-143832200 Weak transcription Spleen Spleen
15 chr6:143812600-143831800 Weak transcription NHEK skin
16 chr6:143812600-143832000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr6:143813400-143828400 Strong transcription Duodenum Mucosa Duodenum
18 chr6:143813400-143829600 Strong transcription Fetal Intestine Large intestine
19 chr6:143813800-143828400 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr6:143814200-143828200 Strong transcription HSMM muscle
21 chr6:143814200-143828800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr6:143814200-143829600 Strong transcription K562 blood
23 chr6:143814400-143830200 Strong transcription Primary monocytes fromperipheralblood blood
24 chr6:143814600-143828200 Strong transcription HepG2 liver
25 chr6:143814600-143828600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr6:143814600-143831000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr6:143814800-143828200 Strong transcription Left Ventricle heart
28 chr6:143814800-143828200 Strong transcription NHLF lung
29 chr6:143814800-143828400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr6:143814800-143828400 Strong transcription Adipose Nuclei Adipose
31 chr6:143814800-143829000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr6:143814800-143829200 Strong transcription Rectal Mucosa Donor 29 rectum
33 chr6:143814800-143829400 Strong transcription HUES64 Cell Line embryonic stem cell
34 chr6:143814800-143831400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr6:143815000-143828400 Strong transcription HUES6 Cell Line embryonic stem cell
36 chr6:143815000-143829000 Strong transcription Liver Liver
37 chr6:143815200-143828400 Weak transcription Primary B cells from peripheral blood blood
38 chr6:143815200-143830200 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr6:143815200-143830800 Strong transcription Placenta Placenta
40 chr6:143815600-143831800 Weak transcription Brain Inferior Temporal Lobe brain
41 chr6:143815800-143830200 Weak transcription Hela-S3 cervix
42 chr6:143815800-143832200 Weak transcription Small Intestine intestine
43 chr6:143816600-143829000 Strong transcription Fetal Muscle Leg muscle
44 chr6:143817000-143830400 Weak transcription Stomach Mucosa stomach
45 chr6:143817400-143831000 Weak transcription iPS-15b Cell Line embryonic stem cell
46 chr6:143817800-143832200 Weak transcription Placenta Amnion Placenta Amnion
47 chr6:143819000-143831800 Weak transcription Brain Angular Gyrus brain
48 chr6:143819200-143832000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
49 chr6:143819600-143828600 Strong transcription Sigmoid Colon Sigmoid Colon
50 chr6:143819800-143827800 Weak transcription HSMMtube muscle

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