Variant report

Variant	rs9496615
Chromosome Location	chr6:143735997-143735998
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs1138410	1.00[CHB][hapmap]
rs12215708	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs12215709	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17072606	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs2432871	1.00[ASN][1000 genomes]
rs2432872	1.00[ASN][1000 genomes]
rs2496586	1.00[ASN][1000 genomes]
rs2496588	1.00[ASN][1000 genomes]
rs35220041	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3748071	1.00[JPT][hapmap]
rs4605902	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs56806297	1.00[EUR][1000 genomes]
rs6570561	1.00[CHB][hapmap]
rs6921292	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7740441	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7744361	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9321908	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9321909	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9321910	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9321911	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9321912	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9399444	1.00[CHB][hapmap]
rs9484749	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9484752	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9484753	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9484756	1.00[EUR][1000 genomes]
rs9496619	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496620	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496621	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496622	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496631	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496632	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496633	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496634	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496635	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496636	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496637	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496639	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496642	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496643	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs9496648	1.00[EUR][1000 genomes]
rs9496649	1.00[CHB][hapmap];1.00[EUR][1000 genomes]
rs9496650	1.00[EUR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:143706600-143757400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr6:143719200-143753200	Weak transcription	Aorta	Aorta
3	chr6:143724200-143748200	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr6:143726800-143765000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
5	chr6:143727600-143753200	Weak transcription	Ovary	ovary
6	chr6:143731800-143743400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr6:143731800-143747400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
8	chr6:143732200-143736600	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr6:143732600-143751000	Weak transcription	Fetal Intestine Small	intestine
10	chr6:143732600-143753200	Weak transcription	Hela-S3	cervix
11	chr6:143733200-143770400	Weak transcription	A549	lung
12	chr6:143733600-143747400	Weak transcription	K562	blood
13	chr6:143734800-143743400	Weak transcription	NHEK	skin
14	chr6:143735000-143743000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr6:143735000-143750800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
16	chr6:143735200-143743600	Weak transcription	HMEC	breast
17	chr6:143735600-143738600	Weak transcription	HepG2	liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links