Variant report

Variant	rs56908820
Chromosome Location	chr6:30106281-30106282
allele	C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs17186951	1.00[EUR][1000 genomes]
rs17187553	1.00[EUR][1000 genomes]
rs17187658	1.00[EUR][1000 genomes]
rs17187826	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17187847	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17194258	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4713289	1.00[EUR][1000 genomes]
rs4959042	1.00[EUR][1000 genomes]
rs60471614	1.00[ASN][1000 genomes]
rs6906435	1.00[ASN][1000 genomes]
rs6917420	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6926097	1.00[ASN][1000 genomes]
rs7740741	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:30103800-30107400	Active TSS	Placenta	Placenta
2	chr6:30104200-30106400	Weak transcription	Stomach Mucosa	stomach
3	chr6:30105000-30106600	Weak transcription	Fetal Intestine Large	intestine
4	chr6:30105400-30106400	Weak transcription	HepG2	liver
5	chr6:30105400-30111600	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr6:30105400-30111800	Weak transcription	Duodenum Mucosa	Duodenum
7	chr6:30106200-30106800	Enhancers	Fetal Intestine Small	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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