Variant report

Variant	rs6917420
Chromosome Location	chr6:30113916-30113917
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs17187553	1.00[EUR][1000 genomes]
rs17187658	1.00[EUR][1000 genomes]
rs17187826	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17187847	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17194258	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4713289	1.00[EUR][1000 genomes]
rs4959042	1.00[EUR][1000 genomes]
rs56908820	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60471614	1.00[ASN][1000 genomes]
rs6906435	1.00[ASN][1000 genomes]
rs6926097	1.00[ASN][1000 genomes]
rs7740741	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:30111400-30114000	Enhancers	HepG2	liver
2	chr6:30112600-30114200	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr6:30112800-30119200	Strong transcription	Placenta	Placenta
4	chr6:30112800-30120800	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr6:30113000-30114600	Weak transcription	Duodenum Mucosa	Duodenum
6	chr6:30113000-30119600	Weak transcription	Rectal Mucosa Donor 31	rectum
7	chr6:30113200-30114000	Enhancers	H9 Cell Line	embryonic stem cell
8	chr6:30113200-30114000	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr6:30113400-30114000	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr6:30113600-30114200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
11	chr6:30113600-30114800	Genic enhancers	Fetal Intestine Small	intestine
12	chr6:30113800-30114200	Enhancers	H1 Cell Line	embryonic stem cell
13	chr6:30113800-30118600	Weak transcription	Fetal Intestine Large	intestine

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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