The 2.0 version of rSNPBase

Variant report

Variant rs56928218
Chromosome Location chr4:26409803-26409804
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:26375200-26439200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
2 chr4:26381600-26439800 Weak transcription Spleen Spleen
3 chr4:26387200-26436000 Weak transcription Placenta Amnion Placenta Amnion
4 chr4:26399800-26437200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr4:26402800-26414600 Weak transcription Pancreas Pancrea
6 chr4:26403000-26411600 Weak transcription Fetal Brain Male brain
7 chr4:26403000-26424800 Weak transcription Fetal Brain Female brain
8 chr4:26403200-26411600 Weak transcription Brain Cingulate Gyrus brain
9 chr4:26404400-26414600 Weak transcription Gastric stomach
10 chr4:26404400-26436000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr4:26404600-26413800 Weak transcription Skeletal Muscle Male skeletal muscle
12 chr4:26404600-26418000 Weak transcription Small Intestine intestine
13 chr4:26406800-26411800 Weak transcription Brain Angular Gyrus brain
14 chr4:26407000-26414600 Weak transcription Stomach Mucosa stomach
15 chr4:26407600-26410000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
16 chr4:26407800-26410200 Strong transcription Fetal Thymus thymus
17 chr4:26407800-26412000 Strong transcription HSMM muscle
18 chr4:26408000-26439000 Weak transcription Hela-S3 cervix
19 chr4:26408200-26410600 Enhancers Primary neutrophils fromperipheralblood blood
20 chr4:26408200-26411600 Weak transcription Colon Smooth Muscle Colon
21 chr4:26408400-26410000 Strong transcription Dnd41 blood
22 chr4:26408400-26410600 Weak transcription Colonic Mucosa Colon
23 chr4:26408400-26410800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr4:26408400-26411200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr4:26408400-26413800 Weak transcription Psoas Muscle Psoas
26 chr4:26408400-26414000 Weak transcription Left Ventricle heart
27 chr4:26408400-26422600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr4:26408400-26427000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr4:26408400-26428400 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr4:26408400-26431000 Weak transcription Fetal Kidney kidney
31 chr4:26408400-26431400 Weak transcription Esophagus oesophagus
32 chr4:26408400-26442000 Weak transcription Aorta Aorta
33 chr4:26408600-26410000 Strong transcription Cortex derived primary cultured neurospheres brain
34 chr4:26408600-26411600 Strong transcription Primary T regulatory cells fromperipheralblood blood
35 chr4:26408600-26411600 Weak transcription Brain Anterior Caudate brain
36 chr4:26408600-26411600 Weak transcription Rectal Smooth Muscle rectum
37 chr4:26408600-26411800 Weak transcription Brain Substantia Nigra brain
38 chr4:26408600-26412200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr4:26408600-26412200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr4:26408600-26413600 Weak transcription Fetal Intestine Small intestine
41 chr4:26408600-26413800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr4:26408600-26413800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr4:26408600-26413800 Weak transcription Ovary ovary
44 chr4:26408600-26414000 Weak transcription Fetal Lung lung
45 chr4:26408600-26414200 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr4:26408600-26414200 Weak transcription Fetal Muscle Leg muscle
47 chr4:26408600-26414400 Weak transcription Brain Inferior Temporal Lobe brain
48 chr4:26408600-26414400 Weak transcription Fetal Adrenal Gland Adrenal Gland
49 chr4:26408600-26414400 Weak transcription Fetal Stomach stomach
50 chr4:26408600-26414600 Weak transcription Lung lung

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Last update: Aug 31, 2015