Variant report

Variant	rs73113402
Chromosome Location	chr4:26350226-26350227
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:26346736..26349677-chr4:26349705..26351500,2	K562	blood:

Extended variants
information (count: 29 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs56714342	0.82[AFR][1000 genomes]
rs56928218	1.00[AMR][1000 genomes]
rs57991198	1.00[AMR][1000 genomes]
rs60621333	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61575372	0.82[AFR][1000 genomes]
rs61577242	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6827673	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6827890	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6832661	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6857982	1.00[AMR][1000 genomes]
rs73113388	0.82[AFR][1000 genomes]
rs73113399	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73121154	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73121162	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73121163	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73121169	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73121170	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73121181	1.00[AMR][1000 genomes]
rs73121192	1.00[AMR][1000 genomes]
rs73121199	1.00[AMR][1000 genomes]
rs73121200	1.00[AMR][1000 genomes]
rs73121201	1.00[AMR][1000 genomes]
rs7655406	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7661241	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7669128	0.91[AFR][1000 genomes]
rs7669953	1.00[AMR][1000 genomes]
rs7677580	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7682946	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7690898	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:77 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26323800-26374400	Weak transcription	Lung	lung
2	chr4:26325000-26374200	Weak transcription	Fetal Intestine Large	intestine
3	chr4:26333400-26356200	Weak transcription	Primary T cells fromperipheralblood	blood
4	chr4:26342000-26350400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
5	chr4:26343400-26356600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
6	chr4:26343600-26357200	Weak transcription	Gastric	stomach
7	chr4:26344200-26350600	Weak transcription	Pancreas	Pancrea
8	chr4:26344200-26357400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr4:26344200-26357800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr4:26344200-26370800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr4:26344200-26374200	Weak transcription	Placenta	Placenta
12	chr4:26344400-26352200	Weak transcription	Primary T cells from cord blood	blood
13	chr4:26344400-26353200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
14	chr4:26344400-26357600	Weak transcription	Sigmoid Colon	Sigmoid Colon
15	chr4:26344800-26350600	Weak transcription	Right Ventricle	heart
16	chr4:26344800-26368000	Weak transcription	Fetal Intestine Small	intestine
17	chr4:26345000-26357200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
18	chr4:26345200-26362600	Weak transcription	Cortex derived primary cultured neurospheres	brain
19	chr4:26345400-26357000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
20	chr4:26345800-26353000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr4:26346400-26351000	Enhancers	H1 Cell Line	embryonic stem cell
22	chr4:26346400-26357200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr4:26347000-26350600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
24	chr4:26347600-26356600	Weak transcription	Monocytes-CD14+_RO01746	blood
25	chr4:26347600-26357600	Weak transcription	HSMM	muscle
26	chr4:26347800-26350600	Weak transcription	Right Atrium	heart
27	chr4:26347800-26351800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
28	chr4:26347800-26353200	Weak transcription	Skeletal Muscle Male	skeletal muscle
29	chr4:26347800-26362600	Weak transcription	Fetal Lung	lung
30	chr4:26348000-26350600	Weak transcription	Psoas Muscle	Psoas
31	chr4:26348000-26350800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr4:26348000-26350800	Weak transcription	GM12878-XiMat	blood
33	chr4:26348000-26351200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
34	chr4:26348000-26351400	Weak transcription	Rectal Smooth Muscle	rectum
35	chr4:26348000-26355200	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
36	chr4:26348000-26356200	Weak transcription	Primary monocytes fromperipheralblood	blood
37	chr4:26348000-26357200	Weak transcription	Skeletal Muscle Female	skeletal muscle
38	chr4:26348000-26357200	Weak transcription	Osteobl	bone
39	chr4:26348000-26357400	Weak transcription	NHLF	lung
40	chr4:26348000-26357600	Weak transcription	Adipose Nuclei	Adipose
41	chr4:26348000-26362600	Weak transcription	Fetal Brain Male	brain
42	chr4:26348000-26374400	Weak transcription	Fetal Stomach	stomach
43	chr4:26348200-26350600	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
44	chr4:26348200-26353400	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
45	chr4:26348200-26354000	Weak transcription	Left Ventricle	heart
46	chr4:26348200-26356200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr4:26348200-26357200	Weak transcription	Fetal Muscle Leg	muscle
48	chr4:26348200-26357400	Weak transcription	Duodenum Smooth Muscle	Duodenum
49	chr4:26348200-26360400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
50	chr4:26348600-26354600	Enhancers	Brain Substantia Nigra	brain

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