Variant report

Variant	rs7669128
Chromosome Location	chr4:26372728-26372729
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:26370806..26373086-chr4:26374915..26376898,2	K562	blood:
2	chr4:26361445..26363354-chr4:26371481..26373196,2	K562	blood:
3	chr4:26321136..26324041-chr4:26372058..26375413,4	MCF-7	breast:

Variant related genes	Relation type
ENSG00000168214	Chromatin interaction

rs_ID	r²[population]
rs56928218	0.86[AFR][1000 genomes]
rs60621333	0.95[AFR][1000 genomes]
rs61577242	0.95[AFR][1000 genomes]
rs6827673	0.91[AFR][1000 genomes]
rs6827890	0.85[AFR][1000 genomes]
rs6832661	0.91[AFR][1000 genomes]
rs73113399	0.91[AFR][1000 genomes]
rs73113402	0.91[AFR][1000 genomes]
rs73121154	0.91[AFR][1000 genomes]
rs73121162	1.00[AFR][1000 genomes]
rs73121163	1.00[AFR][1000 genomes]
rs73121169	1.00[AFR][1000 genomes]
rs73121170	1.00[AFR][1000 genomes]
rs73121192	0.86[AFR][1000 genomes]
rs73121199	0.82[AFR][1000 genomes]
rs73121200	0.82[AFR][1000 genomes]
rs7655406	1.00[AFR][1000 genomes]
rs7661241	1.00[YRI][hapmap];0.91[AFR][1000 genomes]
rs7677580	1.00[YRI][hapmap];1.00[AFR][1000 genomes]
rs7682946	1.00[YRI][hapmap];0.85[AFR][1000 genomes]
rs7690898	0.95[AFR][1000 genomes]

Chromatin state (count:104 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:26323800-26374400	Weak transcription	Lung	lung
2	chr4:26325000-26374200	Weak transcription	Fetal Intestine Large	intestine
3	chr4:26344200-26374200	Weak transcription	Placenta	Placenta
4	chr4:26348000-26374400	Weak transcription	Fetal Stomach	stomach
5	chr4:26351000-26374200	Weak transcription	Right Atrium	heart
6	chr4:26358000-26373800	Weak transcription	Rectal Smooth Muscle	rectum
7	chr4:26358000-26374000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr4:26358000-26374200	Weak transcription	Primary B cells from peripheral blood	blood
9	chr4:26358000-26374200	Weak transcription	Spleen	Spleen
10	chr4:26358000-26387600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr4:26358000-26390600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
12	chr4:26361400-26376600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
13	chr4:26362200-26374200	Weak transcription	HSMMtube	muscle
14	chr4:26362600-26375000	Weak transcription	Aorta	Aorta
15	chr4:26362800-26374200	Weak transcription	Fetal Thymus	thymus
16	chr4:26362800-26374200	Weak transcription	Left Ventricle	heart
17	chr4:26362800-26374200	Weak transcription	Right Ventricle	heart
18	chr4:26364000-26374000	Weak transcription	Primary T helper cells fromperipheralblood	blood
19	chr4:26364000-26374200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
20	chr4:26364200-26373400	Weak transcription	Duodenum Smooth Muscle	Duodenum
21	chr4:26364200-26374000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
22	chr4:26364600-26373200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
23	chr4:26365200-26374200	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
24	chr4:26365200-26374400	Weak transcription	Primary T cells fromperipheralblood	blood
25	chr4:26365800-26374000	Weak transcription	Primary T helper cells PMA-I stimulated	--
26	chr4:26367200-26373200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chr4:26367200-26374200	Weak transcription	HUVEC	blood vessel
28	chr4:26367600-26373400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
29	chr4:26367600-26373800	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
30	chr4:26367600-26373800	Weak transcription	Fetal Kidney	kidney
31	chr4:26367800-26373800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
32	chr4:26367800-26374200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
33	chr4:26367800-26374200	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
34	chr4:26369000-26374200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
35	chr4:26369000-26374400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
36	chr4:26369000-26374400	Weak transcription	Rectal Mucosa Donor 31	rectum
37	chr4:26369200-26373800	Weak transcription	Fetal Intestine Small	intestine
38	chr4:26369200-26374200	Weak transcription	Fetal Muscle Leg	muscle
39	chr4:26369200-26389000	Weak transcription	Fetal Muscle Trunk	muscle
40	chr4:26370000-26373200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
41	chr4:26370200-26374200	Weak transcription	Adipose Nuclei	Adipose
42	chr4:26370400-26373200	Weak transcription	Skeletal Muscle Male	skeletal muscle
43	chr4:26370400-26373400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
44	chr4:26370400-26373800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
45	chr4:26370400-26373800	Weak transcription	H9 Cell Line	embryonic stem cell
46	chr4:26370400-26373800	Weak transcription	GM12878-XiMat	blood
47	chr4:26370400-26374200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
48	chr4:26370400-26374200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
49	chr4:26370400-26374400	Weak transcription	Fetal Brain Male	brain
50	chr4:26370400-26375400	Genic enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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