Variant report

Variant	rs57339071
Chromosome Location	chr2:86171163-86171164
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr2:86167637..86170069-chr2:86171066..86173943,2	K562	blood:
2	chr2:86171021..86172691-chr2:86174826..86177732,2	MCF-7	breast:
3	chr2:86170585..86172715-chr2:86181758..86183932,2	MCF-7	breast:
4	chr2:86165853..86167380-chr2:86170792..86172413,2	MCF-7	breast:

Extended variants
information (count: 49 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:49)

rs_ID	r²[population]
rs10167259	0.81[AFR][1000 genomes]
rs10779967	1.00[ASN][1000 genomes]
rs11127015	1.00[ASN][1000 genomes]
rs11885520	0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs11886175	0.86[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11890563	1.00[ASN][1000 genomes]
rs11891096	1.00[ASN][1000 genomes]
rs11895453	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs11903682	0.84[AMR][1000 genomes]
rs13390107	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13420958	1.00[ASN][1000 genomes]
rs13431245	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1469981	0.86[AMR][1000 genomes]
rs1469982	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17579744	0.86[AMR][1000 genomes]
rs2059353	1.00[ASN][1000 genomes]
rs2288117	1.00[ASN][1000 genomes]
rs311561	1.00[ASN][1000 genomes]
rs311570	1.00[ASN][1000 genomes]
rs311580	1.00[ASN][1000 genomes]
rs311581	1.00[ASN][1000 genomes]
rs311582	1.00[ASN][1000 genomes]
rs311583	1.00[ASN][1000 genomes]
rs311584	1.00[ASN][1000 genomes]
rs34892520	0.92[ASN][1000 genomes]
rs3770073	0.84[ASN][1000 genomes]
rs3810828	1.00[ASN][1000 genomes]
rs4832027	1.00[ASN][1000 genomes]
rs4832239	1.00[ASN][1000 genomes]
rs58077381	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs6707736	0.83[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs6708805	0.83[AMR][1000 genomes]
rs6715623	1.00[ASN][1000 genomes]
rs6741224	0.83[AMR][1000 genomes]
rs6749218	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6752561	0.89[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72847838	0.86[AMR][1000 genomes]
rs72847843	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72847845	0.84[AMR][1000 genomes]
rs72847853	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs7340327	1.00[ASN][1000 genomes]
rs7558040	1.00[ASN][1000 genomes]
rs7569121	0.86[AMR][1000 genomes]
rs7597608	0.82[ASN][1000 genomes]
rs7599498	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs929916	1.00[ASN][1000 genomes]
rs9677675	1.00[ASN][1000 genomes]
rs9679308	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs979940	1.00[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs57339071	MRPL35	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:86169800-86171800	Weak transcription	Liver	Liver

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