The 2.0 version of rSNPBase

Variant report

Variant rs57389274
Chromosome Location chr2:179621353-179621354
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:179483200-179655400 Weak transcription Adipose Nuclei Adipose
2 chr2:179533600-179669200 Weak transcription Primary T helper naive cells from peripheral blood blood
3 chr2:179577800-179640800 Weak transcription Fetal Intestine Large intestine
4 chr2:179588200-179622800 Weak transcription Primary T cells fromperipheralblood blood
5 chr2:179590800-179640400 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr2:179598600-179622200 Weak transcription Primary T helper cells fromperipheralblood blood
7 chr2:179605400-179662400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr2:179610800-179671400 Weak transcription Ovary ovary
9 chr2:179613000-179623600 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr2:179614200-179626400 Strong transcription Primary T cells from cord blood blood
11 chr2:179614200-179645200 Weak transcription Primary T killer naive cells fromperipheralblood blood
12 chr2:179614400-179632400 Weak transcription Primary hematopoietic stem cells blood
13 chr2:179614800-179626600 Strong transcription Primary T regulatory cells fromperipheralblood blood
14 chr2:179614800-179628800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr2:179617200-179627800 Weak transcription Psoas Muscle Psoas
16 chr2:179617400-179622600 Weak transcription Primary B cells from peripheral blood blood
17 chr2:179618600-179626600 Genic enhancers Fetal Heart heart
18 chr2:179619000-179636000 Strong transcription Left Ventricle heart
19 chr2:179619200-179630400 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr2:179619400-179625800 Genic enhancers Skeletal Muscle Female skeletal muscle
21 chr2:179619600-179622600 Genic enhancers Skeletal Muscle Male skeletal muscle
22 chr2:179620000-179621800 Strong transcription Right Ventricle heart
23 chr2:179620000-179622000 Weak transcription Fetal Muscle Trunk muscle
24 chr2:179620400-179622000 Weak transcription Fetal Muscle Leg muscle
25 chr2:179620600-179634400 Weak transcription Brain Anterior Caudate brain
26 chr2:179620800-179622400 Enhancers HSMM muscle
27 chr2:179620800-179622800 Enhancers NHDF-Ad bronchial
28 chr2:179620800-179624200 Strong transcription Primary B cells from cord blood blood
29 chr2:179621000-179622000 Enhancers NH-A brain
30 chr2:179621000-179622600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr2:179621000-179622600 Genic enhancers HSMMtube muscle
32 chr2:179621000-179623000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr2:179621000-179623000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr2:179621000-179623000 Enhancers HMEC breast
35 chr2:179621200-179621600 Strong transcription Primary T helper naive cells fromperipheralblood blood
36 chr2:179621200-179621800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr2:179621200-179622000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
38 chr2:179621200-179622000 Enhancers NHLF lung
39 chr2:179621200-179622200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr2:179621200-179622200 Enhancers Muscle Satellite Cultured Cells --
41 chr2:179621200-179622200 Enhancers Osteobl bone
42 chr2:179621200-179622600 Strong transcription Pancreas Pancrea
43 chr2:179621200-179622600 Enhancers NHEK skin

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Last update: Aug 31, 2015