The 2.0 version of rSNPBase

Variant report

Variant rs5743044
Chromosome Location chr2:190683265-190683266
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:190649800-190713400 Weak transcription Gastric stomach
2 chr2:190650000-190688200 Weak transcription Placenta Amnion Placenta Amnion
3 chr2:190650400-190686800 Weak transcription Thymus Thymus
4 chr2:190650400-190688400 Weak transcription Colonic Mucosa Colon
5 chr2:190650400-190689800 Weak transcription Rectal Smooth Muscle rectum
6 chr2:190650400-190711400 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr2:190650600-190688800 Weak transcription Fetal Heart heart
8 chr2:190650600-190693200 Weak transcription iPS-15b Cell Line embryonic stem cell
9 chr2:190650600-190700400 Weak transcription Hela-S3 cervix
10 chr2:190656800-190685000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr2:190656800-190721000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr2:190658200-190743800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr2:190659000-190685000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr2:190659800-190686800 Weak transcription Fetal Stomach stomach
15 chr2:190659800-190743600 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr2:190661400-190717800 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr2:190662600-190686800 Weak transcription Left Ventricle heart
18 chr2:190662800-190719000 Weak transcription Primary T killer naive cells fromperipheralblood blood
19 chr2:190663000-190685600 Weak transcription Brain Anterior Caudate brain
20 chr2:190663000-190701600 Weak transcription Psoas Muscle Psoas
21 chr2:190663000-190712800 Weak transcription Aorta Aorta
22 chr2:190663200-190700600 Weak transcription Colon Smooth Muscle Colon
23 chr2:190663200-190712400 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr2:190663400-190683400 Weak transcription Brain Hippocampus Middle brain
25 chr2:190664600-190683600 Weak transcription Brain Cingulate Gyrus brain
26 chr2:190664800-190686800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr2:190664800-190741800 Weak transcription Brain Angular Gyrus brain
28 chr2:190665000-190684400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr2:190665000-190696600 Weak transcription H9 Cell Line embryonic stem cell
30 chr2:190666600-190683600 Strong transcription HSMM muscle
31 chr2:190667600-190683600 Weak transcription HMEC breast
32 chr2:190667800-190686800 Weak transcription Pancreas Pancrea
33 chr2:190668400-190684400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr2:190669400-190683800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr2:190669400-190686800 Weak transcription Lung lung
36 chr2:190669400-190743800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
37 chr2:190669600-190709600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr2:190669600-190713200 Weak transcription Ovary ovary
39 chr2:190669800-190709000 Weak transcription Placenta Placenta
40 chr2:190670800-190712800 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr2:190671000-190683600 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr2:190671000-190719600 Weak transcription NH-A brain
43 chr2:190672800-190683800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr2:190675000-190683600 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr2:190675400-190683600 Weak transcription Duodenum Mucosa Duodenum
46 chr2:190675400-190690200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr2:190675400-190693800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
48 chr2:190675600-190683600 Weak transcription HSMMtube muscle
49 chr2:190676200-190687400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
50 chr2:190676200-190712400 Weak transcription K562 blood

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Last update: Aug 31, 2015