Variant report

Variant rs57535472
Chromosome Location chr11:108537567-108537568
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:108535200-108538400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr11:108536200-108537800 Flanking Active TSS Adipose Nuclei Adipose
3 chr11:108536400-108537600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr11:108536400-108537600 Flanking Active TSS Stomach Smooth Muscle stomach
5 chr11:108536400-108537600 Flanking Active TSS Hela-S3 cervix
6 chr11:108536400-108537800 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
7 chr11:108536400-108538000 Enhancers Spleen Spleen
8 chr11:108536400-108539000 Enhancers Sigmoid Colon Sigmoid Colon
9 chr11:108536600-108537600 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
10 chr11:108536600-108537800 Enhancers Primary B cells from peripheral blood blood
11 chr11:108536600-108537800 Enhancers Small Intestine intestine
12 chr11:108536600-108538000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
13 chr11:108536600-108539200 Enhancers Fetal Adrenal Gland Adrenal Gland
14 chr11:108536600-108541000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
15 chr11:108536600-108541000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
16 chr11:108536600-108578400 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr11:108536800-108537600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr11:108536800-108537600 Enhancers Primary hematopoietic stem cells blood
19 chr11:108536800-108537600 Enhancers Brain Hippocampus Middle brain
20 chr11:108536800-108537800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
21 chr11:108536800-108537800 Enhancers Primary B cells from cord blood blood
22 chr11:108536800-108537800 Enhancers Brain Angular Gyrus brain
23 chr11:108536800-108537800 Enhancers Esophagus oesophagus
24 chr11:108536800-108537800 Enhancers Fetal Intestine Small intestine
25 chr11:108536800-108537800 Enhancers Fetal Stomach stomach
26 chr11:108536800-108537800 Enhancers Gastric stomach
27 chr11:108536800-108537800 Enhancers Pancreas Pancrea
28 chr11:108536800-108537800 Enhancers Rectal Mucosa Donor 31 rectum
29 chr11:108536800-108537800 Enhancers Right Atrium heart
30 chr11:108536800-108538000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr11:108536800-108538000 Enhancers Cortex derived primary cultured neurospheres brain
32 chr11:108536800-108538000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
33 chr11:108536800-108538000 Enhancers Brain Anterior Caudate brain
34 chr11:108536800-108538000 Enhancers Stomach Mucosa stomach
35 chr11:108536800-108538600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
36 chr11:108536800-108538600 Enhancers Fetal Heart heart
37 chr11:108536800-108538800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
38 chr11:108536800-108538800 Enhancers Primary T killer naive cells fromperipheralblood blood
39 chr11:108536800-108539000 Enhancers Brain Germinal Matrix brain
40 chr11:108536800-108539600 Enhancers Ovary ovary
41 chr11:108536800-108540400 Enhancers Primary T helper cells fromperipheralblood blood
42 chr11:108536800-108541000 Weak transcription Fetal Muscle Trunk muscle
43 chr11:108536800-108542800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr11:108536800-108546400 Weak transcription Thymus Thymus
45 chr11:108536800-108547400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr11:108536800-108547600 Weak transcription Colonic Mucosa Colon
47 chr11:108536800-108548400 Weak transcription Placenta Amnion Placenta Amnion
48 chr11:108536800-108549800 Weak transcription Pancreatic Islets Pancreatic Islet
49 chr11:108537000-108537600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
50 chr11:108537000-108537600 Enhancers Primary hematopoietic stem cells short term culture blood

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