Variant report

Variant	rs57569547
Chromosome Location	chr4:107470655-107470656
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10008290	0.84[EUR][1000 genomes]
rs10024795	0.84[EUR][1000 genomes]
rs10024903	0.84[EUR][1000 genomes]
rs10025870	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs10049868	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs11930777	0.85[EUR][1000 genomes]
rs11932544	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs1533809	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17036808	0.84[EUR][1000 genomes]
rs28408828	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs28437331	0.81[EUR][1000 genomes]
rs28673393	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs28852765	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs28869529	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs2903417	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs58049329	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs59661502	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6533258	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6833462	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6835938	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs73837165	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7661375	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs7682103	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:107470400-107472000	Enhancers	HUES6 Cell Line	embryonic stem cell
2	chr4:107470400-107485800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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