Variant report

Variant	rs6835938
Chromosome Location	chr4:107446817-107446818
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10008290	0.87[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10024795	0.87[EUR][1000 genomes]
rs10024903	0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10025870	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10049868	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11930777	0.82[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs11932544	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs1533809	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs17036808	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs28408828	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28437331	0.83[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs28673393	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28852765	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs28869529	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2903417	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs57569547	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs58049329	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs59661502	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs6533258	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6833462	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73837165	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7661375	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs7682103	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:107415200-107450200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr4:107445000-107450800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr4:107446400-107447000	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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