Variant report

Variant rs57661362
Chromosome Location chr6:12020769-12020770
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12013800-12033600 Weak transcription Psoas Muscle Psoas
2 chr6:12014000-12023200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr6:12014000-12023200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr6:12014000-12031800 Weak transcription Brain Substantia Nigra brain
5 chr6:12014400-12023200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr6:12014400-12024800 Weak transcription Stomach Mucosa stomach
7 chr6:12014400-12030000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr6:12014600-12021800 ZNF genes & repeats GM12878-XiMat blood
9 chr6:12014600-12032000 Weak transcription Brain Angular Gyrus brain
10 chr6:12015000-12021000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr6:12015000-12022000 Strong transcription Primary hematopoietic stem cells short term culture blood
12 chr6:12015000-12022000 Strong transcription Fetal Muscle Trunk muscle
13 chr6:12015000-12022000 Strong transcription Fetal Muscle Leg muscle
14 chr6:12015200-12021200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr6:12015200-12021400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr6:12015200-12021800 Strong transcription Primary B cells from peripheral blood blood
17 chr6:12015200-12023400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr6:12015200-12024600 Weak transcription NHDF-Ad bronchial
19 chr6:12015400-12021000 Strong transcription NHLF lung
20 chr6:12015400-12021400 Strong transcription NHEK skin
21 chr6:12015400-12023200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr6:12015400-12025000 Weak transcription Small Intestine intestine
23 chr6:12015400-12025400 Strong transcription Liver Liver
24 chr6:12015400-12029200 Weak transcription Brain Anterior Caudate brain
25 chr6:12015400-12034000 Weak transcription Hela-S3 cervix
26 chr6:12015600-12022000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
27 chr6:12015600-12023000 Strong transcription iPS-20b Cell Line embryonic stem cell
28 chr6:12016000-12021800 Strong transcription iPS-18 Cell Line embryonic stem cell
29 chr6:12016000-12022000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr6:12016200-12020800 Strong transcription Duodenum Mucosa Duodenum
31 chr6:12016200-12022000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr6:12016400-12020800 Strong transcription Fetal Lung lung
33 chr6:12016400-12022000 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr6:12016800-12022000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
35 chr6:12017000-12021000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr6:12017000-12021000 Strong transcription Rectal Smooth Muscle rectum
37 chr6:12017000-12021000 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr6:12017000-12022400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr6:12017000-12023400 Strong transcription Fetal Intestine Small intestine
40 chr6:12017200-12021800 Strong transcription Rectal Mucosa Donor 29 rectum
41 chr6:12017600-12020800 Strong transcription Lung lung
42 chr6:12017600-12022000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr6:12017800-12021000 Strong transcription HUES64 Cell Line embryonic stem cell
44 chr6:12017800-12021400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr6:12017800-12024800 Weak transcription NH-A brain
46 chr6:12017800-12025000 Weak transcription ES-I3 Cell Line embryonic stem cell
47 chr6:12017800-12025000 Weak transcription Muscle Satellite Cultured Cells --
48 chr6:12017800-12027800 Weak transcription Left Ventricle heart
49 chr6:12017800-12029400 Weak transcription Primary monocytes fromperipheralblood blood
50 chr6:12017800-12034200 Weak transcription Fetal Kidney kidney

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