The 2.0 version of rSNPBase

Variant report

Variant rs73724338
Chromosome Location chr6:12023358-12023359
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12013800-12033600 Weak transcription Psoas Muscle Psoas
2 chr6:12014000-12031800 Weak transcription Brain Substantia Nigra brain
3 chr6:12014400-12024800 Weak transcription Stomach Mucosa stomach
4 chr6:12014400-12030000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr6:12014600-12032000 Weak transcription Brain Angular Gyrus brain
6 chr6:12015200-12023400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr6:12015200-12024600 Weak transcription NHDF-Ad bronchial
8 chr6:12015400-12025000 Weak transcription Small Intestine intestine
9 chr6:12015400-12025400 Strong transcription Liver Liver
10 chr6:12015400-12029200 Weak transcription Brain Anterior Caudate brain
11 chr6:12015400-12034000 Weak transcription Hela-S3 cervix
12 chr6:12017000-12023400 Strong transcription Fetal Intestine Small intestine
13 chr6:12017800-12024800 Weak transcription NH-A brain
14 chr6:12017800-12025000 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr6:12017800-12025000 Weak transcription Muscle Satellite Cultured Cells --
16 chr6:12017800-12027800 Weak transcription Left Ventricle heart
17 chr6:12017800-12029400 Weak transcription Primary monocytes fromperipheralblood blood
18 chr6:12017800-12034200 Weak transcription Fetal Kidney kidney
19 chr6:12017800-12035000 Weak transcription Brain Inferior Temporal Lobe brain
20 chr6:12017800-12040200 Weak transcription Fetal Brain Male brain
21 chr6:12018000-12024800 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr6:12018400-12024600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr6:12018400-12039600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
24 chr6:12018600-12024800 Weak transcription Colonic Mucosa Colon
25 chr6:12018600-12026400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr6:12018600-12031400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr6:12018600-12049400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
28 chr6:12018600-12052000 Weak transcription Thymus Thymus
29 chr6:12018800-12024800 Weak transcription Duodenum Smooth Muscle Duodenum
30 chr6:12018800-12030200 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr6:12019000-12023600 Enhancers Primary T helper cells fromperipheralblood blood
32 chr6:12019000-12024800 Weak transcription Colon Smooth Muscle Colon
33 chr6:12019000-12025200 Weak transcription Stomach Smooth Muscle stomach
34 chr6:12019000-12034200 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr6:12019200-12025600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr6:12019400-12023600 Enhancers Primary T helper naive cells fromperipheralblood blood
37 chr6:12019400-12024600 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr6:12019400-12027000 Weak transcription Brain Cingulate Gyrus brain
39 chr6:12019600-12024600 Weak transcription HMEC breast
40 chr6:12019600-12025000 Weak transcription Gastric stomach
41 chr6:12019600-12028400 Weak transcription Brain Germinal Matrix brain
42 chr6:12020400-12023400 Enhancers Ovary ovary
43 chr6:12020600-12024000 Weak transcription Fetal Heart heart
44 chr6:12020600-12024600 Weak transcription Placenta Amnion Placenta Amnion
45 chr6:12020800-12024600 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr6:12020800-12024800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr6:12020800-12024800 Weak transcription Osteobl bone
48 chr6:12020800-12025000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr6:12020800-12025000 Weak transcription Brain Hippocampus Middle brain
50 chr6:12020800-12025000 Weak transcription Right Atrium heart

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Last update: Aug 31, 2015