Variant report

Variant	rs57686592
Chromosome Location	chr14:104488704-104488705
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:104488327..104490574-chr14:104494695..104496353,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs55797395	0.91[AFR][1000 genomes]
rs56253620	0.91[AFR][1000 genomes]
rs58073768	0.81[AFR][1000 genomes]
rs59439840	0.90[AFR][1000 genomes]
rs74086476	0.81[AFR][1000 genomes]
rs74086478	0.90[AFR][1000 genomes]
rs74086745	0.90[AFR][1000 genomes]
rs74086746	0.90[AFR][1000 genomes]
rs74086749	0.90[AFR][1000 genomes]
rs74086750	0.81[AFR][1000 genomes]
rs74086754	0.81[AFR][1000 genomes]
rs74086755	0.81[AFR][1000 genomes]
rs74086758	0.81[AFR][1000 genomes]
rs74086769	0.91[AFR][1000 genomes]
rs74086775	0.91[AFR][1000 genomes]
rs74086785	0.91[AFR][1000 genomes]
rs74086982	0.91[AFR][1000 genomes]
rs74089139	0.91[AFR][1000 genomes]
rs74089152	1.00[AFR][1000 genomes]
rs74089176	1.00[AFR][1000 genomes]
rs74089537	0.91[AFR][1000 genomes]
rs74089539	0.91[AFR][1000 genomes]
rs74089546	0.91[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045162	chr14:104140525-104594841	Flanking Active TSS Strong transcription Bivalent Enhancer Enhancers Active TSS Weak transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
2	nsv542204	chr14:104140525-104594841	Active TSS Enhancers Strong transcription Weak transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	87 gene(s)	inside rSNPs	diseases
3	nsv902319	chr14:104255083-104620077	Weak transcription Enhancers Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	64 gene(s)	inside rSNPs	diseases
4	nsv1049690	chr14:104411621-104575838	Enhancers ZNF genes & repeats Weak transcription Bivalent/Poised TSS Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
5	nsv542208	chr14:104411621-104575838	Enhancers ZNF genes & repeats Genic enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Strong transcription Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
6	nsv526680	chr14:104427043-104568472	Flanking Active TSS Enhancers Bivalent Enhancer Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
7	nsv1047990	chr14:104460605-104556463	Bivalent Enhancer Bivalent/Poised TSS Weak transcription Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:104473600-104495400	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr14:104474000-104491600	Weak transcription	Primary neutrophils fromperipheralblood	blood
3	chr14:104478800-104488800	Weak transcription	Left Ventricle	heart
4	chr14:104485000-104491800	Weak transcription	Monocytes-CD14+_RO01746	blood
5	chr14:104488400-104489400	Enhancers	Fetal Heart	heart
6	chr14:104488600-104488800	Flanking Active TSS	Skeletal Muscle Female	skeletal muscle

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