The 2.0 version of rSNPBase

Variant report

Variant rs57926982
Chromosome Location chr2:54805133-54805134
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:54795800-54807000 Enhancers HUES6 Cell Line embryonic stem cell
2 chr2:54795800-54807600 Enhancers Duodenum Smooth Muscle Duodenum
3 chr2:54796000-54807600 Enhancers Brain Angular Gyrus brain
4 chr2:54796200-54806200 Enhancers Right Atrium heart
5 chr2:54796200-54806400 Enhancers Brain Anterior Caudate brain
6 chr2:54796200-54806800 Enhancers Pancreas Pancrea
7 chr2:54796400-54808800 Enhancers Skeletal Muscle Male skeletal muscle
8 chr2:54796800-54806800 Enhancers Skeletal Muscle Female skeletal muscle
9 chr2:54796800-54807400 Enhancers Psoas Muscle Psoas
10 chr2:54796800-54810200 Enhancers Sigmoid Colon Sigmoid Colon
11 chr2:54796800-54810600 Enhancers Small Intestine intestine
12 chr2:54797400-54808400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr2:54797800-54807000 Enhancers iPS-15b Cell Line embryonic stem cell
14 chr2:54798600-54805600 Enhancers NHDF-Ad bronchial
15 chr2:54798800-54806400 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr2:54798800-54806600 Weak transcription Fetal Brain Male brain
17 chr2:54800000-54807400 Enhancers Right Ventricle heart
18 chr2:54800200-54805800 Enhancers NHLF lung
19 chr2:54800200-54806400 Enhancers Stomach Mucosa stomach
20 chr2:54800400-54805600 Genic enhancers HSMM muscle
21 chr2:54800600-54805400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr2:54800800-54807000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
23 chr2:54801600-54806200 Enhancers Primary T helper cells fromperipheralblood blood
24 chr2:54801600-54806600 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr2:54801600-54808600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
26 chr2:54801800-54806400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
27 chr2:54801800-54806400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
28 chr2:54801800-54806600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
29 chr2:54801800-54806600 Enhancers Primary T regulatory cells fromperipheralblood blood
30 chr2:54801800-54806600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr2:54801800-54807400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
32 chr2:54801800-54811000 Enhancers Primary Natural Killer cells fromperipheralblood blood
33 chr2:54802000-54805200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
34 chr2:54802000-54805400 Enhancers Duodenum Mucosa Duodenum
35 chr2:54802000-54806400 Enhancers Rectal Mucosa Donor 31 rectum
36 chr2:54802000-54807000 Enhancers iPS-18 Cell Line embryonic stem cell
37 chr2:54802000-54808400 Enhancers Primary neutrophils fromperipheralblood blood
38 chr2:54802000-54816400 Enhancers Liver Liver
39 chr2:54802200-54805200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
40 chr2:54802200-54806600 Enhancers Primary T helper 17 cells PMA-I stimulated --
41 chr2:54802200-54822600 Weak transcription Esophagus oesophagus
42 chr2:54802400-54805400 Genic enhancers Primary B cells from peripheral blood blood
43 chr2:54802400-54808600 Weak transcription Fetal Muscle Trunk muscle
44 chr2:54802600-54805400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
45 chr2:54802600-54805600 Enhancers Gastric stomach
46 chr2:54802600-54806400 Enhancers Colonic Mucosa Colon
47 chr2:54802800-54805600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
48 chr2:54802800-54806400 Enhancers Primary T helper cells PMA-I stimulated --
49 chr2:54802800-54806600 Weak transcription K562 blood
50 chr2:54803000-54805800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015