The 2.0 version of rSNPBase

Variant report

Variant rs57974576
Chromosome Location chr6:12051156-12051157
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12018600-12052000 Weak transcription Thymus Thymus
2 chr6:12034800-12061000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr6:12035200-12052200 Weak transcription Stomach Mucosa stomach
4 chr6:12040200-12060800 Weak transcription HUES48 Cell Line embryonic stem cell
5 chr6:12040400-12058800 Weak transcription Fetal Muscle Leg muscle
6 chr6:12040400-12059600 Weak transcription iPS-18 Cell Line embryonic stem cell
7 chr6:12041000-12060800 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr6:12041400-12052200 Weak transcription HUES6 Cell Line embryonic stem cell
9 chr6:12045200-12052000 Weak transcription Primary hematopoietic stem cells blood
10 chr6:12045400-12051400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
11 chr6:12045400-12052600 Weak transcription Duodenum Mucosa Duodenum
12 chr6:12045600-12051400 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr6:12045600-12051400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
14 chr6:12045600-12056000 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr6:12045600-12058200 Weak transcription Small Intestine intestine
16 chr6:12045600-12058600 Weak transcription A549 lung
17 chr6:12045600-12058800 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr6:12045600-12059800 Weak transcription Left Ventricle heart
19 chr6:12045600-12059800 Weak transcription Psoas Muscle Psoas
20 chr6:12045600-12061000 Weak transcription Fetal Thymus thymus
21 chr6:12045600-12061000 Weak transcription Pancreas Pancrea
22 chr6:12045600-12061200 Weak transcription Gastric stomach
23 chr6:12045600-12065800 Weak transcription Aorta Aorta
24 chr6:12045600-12066200 Weak transcription HSMM muscle
25 chr6:12045600-12066400 Weak transcription Hela-S3 cervix
26 chr6:12045800-12051200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr6:12045800-12052200 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr6:12045800-12052400 Weak transcription Stomach Smooth Muscle stomach
29 chr6:12045800-12066000 Weak transcription HUVEC blood vessel
30 chr6:12046000-12053000 Weak transcription NHDF-Ad bronchial
31 chr6:12046000-12060800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr6:12046600-12054400 Enhancers Primary B cells from peripheral blood blood
33 chr6:12047400-12053200 Enhancers Primary neutrophils fromperipheralblood blood
34 chr6:12047400-12054000 Enhancers Primary monocytes fromperipheralblood blood
35 chr6:12047800-12053800 Enhancers Primary T helper cells PMA-I stimulated --
36 chr6:12047800-12054200 Enhancers Primary B cells from cord blood blood
37 chr6:12047800-12058800 Weak transcription Esophagus oesophagus
38 chr6:12047800-12059800 Weak transcription H1 Cell Line embryonic stem cell
39 chr6:12048000-12060800 Weak transcription Fetal Intestine Small intestine
40 chr6:12048000-12061200 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr6:12048200-12056000 Weak transcription H9 Cell Line embryonic stem cell
42 chr6:12048200-12058400 Weak transcription Liver Liver
43 chr6:12048200-12058400 Weak transcription NHEK skin
44 chr6:12048200-12060800 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr6:12048200-12062800 Weak transcription K562 blood
46 chr6:12048400-12051200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
47 chr6:12048400-12058400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr6:12048600-12060800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr6:12048600-12060800 Weak transcription Fetal Intestine Large intestine
50 chr6:12048600-12061000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived

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Last update: Aug 31, 2015