The 2.0 version of rSNPBase

Variant report

Variant rs6921949
Chromosome Location chr6:12022144-12022145
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:12013800-12033600 Weak transcription Psoas Muscle Psoas
2 chr6:12014000-12023200 Weak transcription ES-WA7 Cell Line embryonic stem cell
3 chr6:12014000-12023200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr6:12014000-12031800 Weak transcription Brain Substantia Nigra brain
5 chr6:12014400-12023200 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr6:12014400-12024800 Weak transcription Stomach Mucosa stomach
7 chr6:12014400-12030000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
8 chr6:12014600-12032000 Weak transcription Brain Angular Gyrus brain
9 chr6:12015200-12023400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr6:12015200-12024600 Weak transcription NHDF-Ad bronchial
11 chr6:12015400-12023200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr6:12015400-12025000 Weak transcription Small Intestine intestine
13 chr6:12015400-12025400 Strong transcription Liver Liver
14 chr6:12015400-12029200 Weak transcription Brain Anterior Caudate brain
15 chr6:12015400-12034000 Weak transcription Hela-S3 cervix
16 chr6:12015600-12023000 Strong transcription iPS-20b Cell Line embryonic stem cell
17 chr6:12017000-12022400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr6:12017000-12023400 Strong transcription Fetal Intestine Small intestine
19 chr6:12017800-12024800 Weak transcription NH-A brain
20 chr6:12017800-12025000 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr6:12017800-12025000 Weak transcription Muscle Satellite Cultured Cells --
22 chr6:12017800-12027800 Weak transcription Left Ventricle heart
23 chr6:12017800-12029400 Weak transcription Primary monocytes fromperipheralblood blood
24 chr6:12017800-12034200 Weak transcription Fetal Kidney kidney
25 chr6:12017800-12035000 Weak transcription Brain Inferior Temporal Lobe brain
26 chr6:12017800-12040200 Weak transcription Fetal Brain Male brain
27 chr6:12018000-12022200 Strong transcription Fetal Stomach stomach
28 chr6:12018000-12024800 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr6:12018400-12024600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
30 chr6:12018400-12039600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
31 chr6:12018600-12022400 Strong transcription Fetal Adrenal Gland Adrenal Gland
32 chr6:12018600-12024800 Weak transcription Colonic Mucosa Colon
33 chr6:12018600-12026400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr6:12018600-12031400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr6:12018600-12049400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
36 chr6:12018600-12052000 Weak transcription Thymus Thymus
37 chr6:12018800-12024800 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr6:12018800-12030200 Weak transcription Cortex derived primary cultured neurospheres brain
39 chr6:12019000-12023600 Enhancers Primary T helper cells fromperipheralblood blood
40 chr6:12019000-12024800 Weak transcription Colon Smooth Muscle Colon
41 chr6:12019000-12025200 Weak transcription Stomach Smooth Muscle stomach
42 chr6:12019000-12034200 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr6:12019200-12022800 Weak transcription HUES6 Cell Line embryonic stem cell
44 chr6:12019200-12025600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr6:12019400-12023600 Enhancers Primary T helper naive cells fromperipheralblood blood
46 chr6:12019400-12024600 Weak transcription Primary T regulatory cells fromperipheralblood blood
47 chr6:12019400-12027000 Weak transcription Brain Cingulate Gyrus brain
48 chr6:12019600-12024600 Weak transcription HMEC breast
49 chr6:12019600-12025000 Weak transcription Gastric stomach
50 chr6:12019600-12028400 Weak transcription Brain Germinal Matrix brain

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Last update: Aug 31, 2015