The 2.0 version of rSNPBase

Variant report

Variant rs58068554
Chromosome Location chr3:69235454-69235455
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:69218400-69247400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
2 chr3:69218400-69247800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
3 chr3:69222800-69237400 Strong transcription Dnd41 blood
4 chr3:69222800-69245400 Strong transcription Primary neutrophils fromperipheralblood blood
5 chr3:69223400-69237600 Strong transcription Primary monocytes fromperipheralblood blood
6 chr3:69224400-69237400 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr3:69226800-69246800 Strong transcription Monocytes-CD14+_RO01746 blood
8 chr3:69228400-69246800 Weak transcription Primary T cells from cord blood blood
9 chr3:69228600-69237600 Strong transcription Fetal Thymus thymus
10 chr3:69228600-69238200 Strong transcription Fetal Lung lung
11 chr3:69228600-69248600 Weak transcription Stomach Smooth Muscle stomach
12 chr3:69228800-69241200 Strong transcription Primary T helper cells fromperipheralblood blood
13 chr3:69228800-69245800 Strong transcription Primary T helper cells PMA-I stimulated --
14 chr3:69228800-69246000 Strong transcription Primary T regulatory cells fromperipheralblood blood
15 chr3:69229000-69248400 Weak transcription Primary B cells from cord blood blood
16 chr3:69229200-69246000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
17 chr3:69229400-69237000 Strong transcription Lung lung
18 chr3:69229400-69237600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr3:69229600-69248200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr3:69230200-69238400 Weak transcription Cortex derived primary cultured neurospheres brain
21 chr3:69230600-69240000 Weak transcription Right Ventricle heart
22 chr3:69230600-69243000 Weak transcription Fetal Kidney kidney
23 chr3:69230600-69248600 Weak transcription Aorta Aorta
24 chr3:69230600-69248600 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr3:69230800-69235800 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr3:69230800-69248600 Weak transcription Ovary ovary
27 chr3:69231000-69240000 Weak transcription Colonic Mucosa Colon
28 chr3:69231000-69240800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr3:69231000-69240800 Weak transcription Esophagus oesophagus
30 chr3:69231000-69240800 Weak transcription Spleen Spleen
31 chr3:69231000-69243600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr3:69231200-69239800 Weak transcription Gastric stomach
33 chr3:69231200-69246800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr3:69231200-69248600 Weak transcription Left Ventricle heart
35 chr3:69231200-69248600 Weak transcription Small Intestine intestine
36 chr3:69231400-69239600 Weak transcription Pancreas Pancrea
37 chr3:69231400-69246400 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr3:69231400-69246600 Weak transcription Fetal Brain Male brain
39 chr3:69231400-69248400 Weak transcription Rectal Smooth Muscle rectum
40 chr3:69231400-69249600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
41 chr3:69231600-69248600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
42 chr3:69231800-69240000 Weak transcription Fetal Heart heart
43 chr3:69231800-69249600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
44 chr3:69232000-69235600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr3:69232000-69237000 Strong transcription NHEK skin
46 chr3:69232000-69240000 Weak transcription Brain Germinal Matrix brain
47 chr3:69232000-69247400 Weak transcription Hela-S3 cervix
48 chr3:69232000-69248800 Weak transcription HUES6 Cell Line embryonic stem cell
49 chr3:69232000-69249400 Weak transcription iPS-20b Cell Line embryonic stem cell
50 chr3:69232000-69275600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015