The 2.0 version of rSNPBase

Variant report

Variant rs58231022
Chromosome Location chr5:145206937-145206938
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145158400-145207000 Weak transcription Esophagus oesophagus
2 chr5:145162800-145212800 Weak transcription Rectal Smooth Muscle rectum
3 chr5:145170600-145213400 Weak transcription Placenta Amnion Placenta Amnion
4 chr5:145172800-145214200 Weak transcription Right Ventricle heart
5 chr5:145174200-145209200 Weak transcription Colon Smooth Muscle Colon
6 chr5:145177200-145209000 Weak transcription Muscle Satellite Cultured Cells --
7 chr5:145177200-145209200 Weak transcription NH-A brain
8 chr5:145177400-145209000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
9 chr5:145179200-145207000 Weak transcription Pancreas Pancrea
10 chr5:145179400-145209400 Weak transcription Stomach Mucosa stomach
11 chr5:145182800-145207000 Weak transcription Small Intestine intestine
12 chr5:145183600-145214000 Weak transcription Fetal Kidney kidney
13 chr5:145187000-145209200 Weak transcription A549 lung
14 chr5:145192800-145209200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr5:145194800-145209000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr5:145195200-145212800 Weak transcription Colonic Mucosa Colon
17 chr5:145196200-145211800 Weak transcription Gastric stomach
18 chr5:145196800-145214000 Weak transcription Fetal Stomach stomach
19 chr5:145197800-145209200 Weak transcription Primary hematopoietic stem cells blood
20 chr5:145198000-145213600 Weak transcription Stomach Smooth Muscle stomach
21 chr5:145198200-145210200 Weak transcription Duodenum Smooth Muscle Duodenum
22 chr5:145198800-145209000 Weak transcription Ovary ovary
23 chr5:145198800-145212000 Weak transcription Aorta Aorta
24 chr5:145201400-145209400 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr5:145201400-145214200 Weak transcription Lung lung
26 chr5:145201800-145210400 Weak transcription Breast Myoepithelial Primary Cells Breast
27 chr5:145202000-145209000 Weak transcription HUVEC blood vessel
28 chr5:145204000-145208800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr5:145204000-145209200 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr5:145204000-145209600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr5:145204200-145207000 Weak transcription Fetal Brain Male brain
32 chr5:145204200-145209000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr5:145204200-145209000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
34 chr5:145204200-145209200 Weak transcription Fetal Lung lung
35 chr5:145204200-145209600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr5:145205400-145209400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr5:145206000-145209000 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr5:145206400-145207000 Enhancers Fetal Heart heart
39 chr5:145206400-145207400 Enhancers Liver Liver
40 chr5:145206400-145207400 Enhancers Duodenum Mucosa Duodenum
41 chr5:145206600-145207200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr5:145206600-145207200 Enhancers Sigmoid Colon Sigmoid Colon
43 chr5:145206600-145207400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr5:145206600-145207400 Enhancers Fetal Intestine Large intestine
45 chr5:145206600-145207400 Enhancers Fetal Intestine Small intestine
46 chr5:145206600-145207400 Enhancers HMEC breast
47 chr5:145206600-145207400 Enhancers NHEK skin
48 chr5:145206800-145207400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
49 chr5:145206800-145207400 Enhancers HepG2 liver
50 chr5:145206800-145207400 Flanking Active TSS K562 blood

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Last update: Aug 31, 2015