Variant report
Variant | rs58237960 |
---|---|
Chromosome Location | chr1:59394450-59394451 |
allele | A/C |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:59385200-59397800 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
2 | chr1:59386600-59399800 | Enhancers | Fetal Intestine Small | intestine |
3 | chr1:59388400-59397800 | Weak transcription | NHLF | lung |
4 | chr1:59388600-59397800 | Weak transcription | Lung | lung |
5 | chr1:59388800-59394600 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
6 | chr1:59388800-59397800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
7 | chr1:59388800-59398600 | Weak transcription | Pancreas | Pancrea |
8 | chr1:59389000-59398800 | Weak transcription | Right Atrium | heart |
9 | chr1:59389000-59407000 | Weak transcription | Spleen | Spleen |
10 | chr1:59389200-59394600 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
11 | chr1:59389200-59395400 | Weak transcription | Fetal Thymus | thymus |
12 | chr1:59389200-59398600 | Weak transcription | Psoas Muscle | Psoas |
13 | chr1:59389200-59401400 | Weak transcription | Left Ventricle | heart |
14 | chr1:59390200-59399600 | Enhancers | Placenta Amnion | Placenta Amnion |
15 | chr1:59391200-59399600 | Enhancers | Fetal Intestine Large | intestine |
16 | chr1:59391600-59396200 | Enhancers | Duodenum Mucosa | Duodenum |
17 | chr1:59391800-59394800 | Enhancers | Stomach Mucosa | stomach |
18 | chr1:59391800-59396600 | Enhancers | Rectal Mucosa Donor 31 | rectum |
19 | chr1:59392000-59397800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
20 | chr1:59392000-59399600 | Enhancers | Foreskin Keratinocyte Primary Cells skin03 | Skin |
21 | chr1:59392200-59394800 | Enhancers | Rectal Mucosa Donor 29 | rectum |
22 | chr1:59392600-59395000 | Enhancers | NHEK | skin |
23 | chr1:59392600-59395200 | Enhancers | Foreskin Keratinocyte Primary Cells skin02 | Skin |
24 | chr1:59392600-59396200 | Enhancers | HMEC | breast |
25 | chr1:59392600-59398600 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
26 | chr1:59392600-59399400 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
27 | chr1:59392800-59395000 | Enhancers | A549 | lung |
28 | chr1:59393000-59396000 | Enhancers | K562 | blood |
29 | chr1:59393200-59398400 | Weak transcription | Adipose Nuclei | Adipose |
30 | chr1:59393400-59395400 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
31 | chr1:59393400-59397600 | Weak transcription | Primary monocytes fromperipheralblood | blood |
32 | chr1:59393400-59398800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
33 | chr1:59393600-59397600 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
34 | chr1:59393600-59398600 | Weak transcription | Fetal Lung | lung |
35 | chr1:59393600-59400800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
36 | chr1:59393600-59406800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
37 | chr1:59393800-59394600 | Weak transcription | Gastric | stomach |
38 | chr1:59393800-59395200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
39 | chr1:59393800-59396000 | Flanking Active TSS | Hela-S3 | cervix |
40 | chr1:59393800-59398600 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
41 | chr1:59394000-59395200 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
42 | chr1:59394200-59395600 | Enhancers | Colonic Mucosa | Colon |
43 | chr1:59394400-59395200 | Weak transcription | Esophagus | oesophagus |
44 | chr1:59394400-59395800 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
45 | chr1:59394400-59396200 | Bivalent Enhancer | HepG2 | liver |
46 | chr1:59394400-59396600 | Enhancers | Small Intestine | intestine |