The 2.0 version of rSNPBase

Variant report

Variant rs57136299
Chromosome Location chr1:59351502-59351503
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:59319800-59361400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
2 chr1:59344800-59356000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
3 chr1:59346200-59353600 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
4 chr1:59346200-59353800 Enhancers Psoas Muscle Psoas
5 chr1:59346400-59353400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
6 chr1:59346400-59354000 Enhancers Fetal Intestine Small intestine
7 chr1:59346600-59352000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
8 chr1:59346600-59352000 Enhancers HUVEC blood vessel
9 chr1:59346600-59354000 Enhancers Fetal Intestine Large intestine
10 chr1:59346800-59352000 Enhancers Fetal Adrenal Gland Adrenal Gland
11 chr1:59346800-59353400 Enhancers Primary monocytes fromperipheralblood blood
12 chr1:59347000-59352000 Enhancers Liver Liver
13 chr1:59347000-59352000 Enhancers Skeletal Muscle Female skeletal muscle
14 chr1:59347000-59352600 Enhancers NH-A brain
15 chr1:59347000-59352800 Enhancers Left Ventricle heart
16 chr1:59347000-59353200 Enhancers Stomach Mucosa stomach
17 chr1:59347000-59353400 Enhancers Muscle Satellite Cultured Cells --
18 chr1:59347000-59353800 Enhancers Lung lung
19 chr1:59347000-59353800 Enhancers Right Atrium heart
20 chr1:59347000-59354800 Enhancers NHDF-Ad bronchial
21 chr1:59347200-59353800 Enhancers Sigmoid Colon Sigmoid Colon
22 chr1:59347200-59354000 Enhancers Pancreas Pancrea
23 chr1:59347600-59352600 Enhancers Brain Anterior Caudate brain
24 chr1:59347800-59352000 Enhancers Pancreatic Islets Pancreatic Islet
25 chr1:59347800-59352800 Enhancers A549 lung
26 chr1:59348000-59353000 Enhancers Fetal Muscle Leg muscle
27 chr1:59348000-59360800 Weak transcription Placenta Amnion Placenta Amnion
28 chr1:59348200-59352200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
29 chr1:59348200-59353600 Enhancers Fetal Thymus thymus
30 chr1:59348400-59352200 Enhancers Fetal Muscle Trunk muscle
31 chr1:59348600-59351800 Enhancers Fetal Heart heart
32 chr1:59348600-59352800 Enhancers Duodenum Smooth Muscle Duodenum
33 chr1:59348600-59353600 Enhancers Primary Natural Killer cells fromperipheralblood blood
34 chr1:59348800-59352200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr1:59349000-59351600 Weak transcription HSMMtube muscle
36 chr1:59349000-59352200 Weak transcription Gastric stomach
37 chr1:59349000-59354400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:59349400-59351600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:59349400-59352400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
40 chr1:59349600-59351600 Weak transcription HSMM muscle
41 chr1:59349600-59352600 Enhancers Duodenum Mucosa Duodenum
42 chr1:59349600-59353000 Enhancers Primary T killer memory cells from peripheral blood blood
43 chr1:59349600-59353800 Enhancers Primary T killer naive cells fromperipheralblood blood
44 chr1:59349800-59351600 Weak transcription HMEC breast
45 chr1:59349800-59353800 Enhancers Adipose Nuclei Adipose
46 chr1:59350000-59353200 Enhancers Thymus Thymus
47 chr1:59350000-59353400 Weak transcription NHEK skin
48 chr1:59350200-59352000 Enhancers Primary hematopoietic stem cells blood
49 chr1:59350200-59352400 Enhancers Cortex derived primary cultured neurospheres brain
50 chr1:59350200-59352800 Enhancers Brain Hippocampus Middle brain

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Last update: Aug 31, 2015