Variant report
Variant | rs58289791 |
---|---|
Chromosome Location | chr10:26171396-26171397 |
allele | A/C/G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:1)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
(count:1 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-MYO3A-2 | chr10:26171337-26171989 | XLOC_008417 |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10128266 | 1.00[AMR][1000 genomes] |
rs10128512 | 1.00[AMR][1000 genomes] |
rs10828903 | 1.00[AMR][1000 genomes] |
rs11014826 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11014829 | 0.84[AFR][1000 genomes] |
rs11014835 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11014836 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11014838 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11014843 | 1.00[AMR][1000 genomes] |
rs11014844 | 1.00[AMR][1000 genomes] |
rs11014858 | 1.00[AMR][1000 genomes] |
rs12249093 | 1.00[AMR][1000 genomes] |
rs12251038 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12252281 | 1.00[AMR][1000 genomes] |
rs12255497 | 1.00[AMR][1000 genomes] |
rs12258905 | 1.00[AMR][1000 genomes] |
rs12260850 | 1.00[AMR][1000 genomes] |
rs12267363 | 1.00[AMR][1000 genomes] |
rs7073840 | 1.00[AMR][1000 genomes] |
rs7086945 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7086963 | 1.00[AMR][1000 genomes] |
rs7087106 | 1.00[AMR][1000 genomes] |
rs7089023 | 1.00[AMR][1000 genomes] |
rs7093036 | 1.00[AMR][1000 genomes] |
rs7099128 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7099929 | 1.00[AMR][1000 genomes] |
rs73610364 | 1.00[AMR][1000 genomes] |
rs73610365 | 1.00[AMR][1000 genomes] |
rs7904403 | 1.00[AMR][1000 genomes] |
rs7905635 | 1.00[AMR][1000 genomes] |
rs7911886 | 1.00[AMR][1000 genomes] |
rs7924004 | 1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv894974 | chr10:26028530-26322783 | Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
2 | nsv1051756 | chr10:26092320-26277478 | Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
No data |