Variant report
Variant | rs12267363 |
---|---|
Chromosome Location | chr10:26236602-26236603 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr10:26234625..26237519-chr10:26239131..26242343,3 | K562 | blood: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000095777 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs10128266 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs10128512 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs10828903 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11014826 | 1.00[AMR][1000 genomes] |
rs11014835 | 1.00[AMR][1000 genomes] |
rs11014836 | 1.00[AMR][1000 genomes] |
rs11014838 | 1.00[AMR][1000 genomes] |
rs11014843 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11014844 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs11014849 | 0.85[AFR][1000 genomes] |
rs11014858 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12249093 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12251038 | 1.00[AMR][1000 genomes] |
rs12252281 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12254587 | 1.00[AMR][1000 genomes] |
rs12255497 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12258905 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs12260850 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs58289791 | 1.00[AMR][1000 genomes] |
rs7073840 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7086945 | 1.00[AMR][1000 genomes] |
rs7086963 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7087106 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7089023 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7093036 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7099128 | 1.00[AMR][1000 genomes] |
rs7099929 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73610364 | 0.86[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs73610365 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7904403 | 1.00[AMR][1000 genomes] |
rs7905635 | 1.00[AMR][1000 genomes] |
rs7911886 | 0.91[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs7924004 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv894974 | chr10:26028530-26322783 | Weak transcription Enhancers Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
2 | nsv1051756 | chr10:26092320-26277478 | Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Weak transcription Flanking Active TSS ZNF genes & repeats Strong transcription Genic enhancers Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 8 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr10:26233600-26237000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
2 | chr10:26236200-26238400 | Weak transcription | Pancreatic Islets | Pancreatic Islet |