Variant report

Variant rs58316565
Chromosome Location chr1:224886026-224886027
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:32 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224862400-224902000 Weak transcription Pancreas Pancrea
2 chr1:224875600-224888400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:224877600-224891600 Weak transcription Dnd41 blood
4 chr1:224881400-224895400 Weak transcription Ovary ovary
5 chr1:224884000-224887000 Enhancers Cortex derived primary cultured neurospheres brain
6 chr1:224884200-224886200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
7 chr1:224884200-224886400 Enhancers Brain Germinal Matrix brain
8 chr1:224884200-224887400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:224884600-224886200 Enhancers Brain Cingulate Gyrus brain
10 chr1:224884800-224886200 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:224884800-224886200 Enhancers Brain Angular Gyrus brain
12 chr1:224884800-224886400 Enhancers Brain Hippocampus Middle brain
13 chr1:224884800-224886800 Enhancers Brain Inferior Temporal Lobe brain
14 chr1:224885000-224886200 Enhancers Adipose Nuclei Adipose
15 chr1:224885000-224886400 Enhancers Brain Substantia Nigra brain
16 chr1:224885000-224886600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr1:224885000-224920200 Weak transcription Right Atrium heart
18 chr1:224885200-224886200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:224885200-224891200 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:224885600-224886200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:224885600-224886200 Enhancers Brain Anterior Caudate brain
22 chr1:224885600-224886400 Enhancers Brain Dorsolateral Prefrontal Cortex brain
23 chr1:224885600-224895200 Weak transcription NH-A brain
24 chr1:224885800-224886200 Genic enhancers NHDF-Ad bronchial
25 chr1:224885800-224886600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:224885800-224891200 Weak transcription NHLF lung
27 chr1:224885800-224891400 Weak transcription HUES64 Cell Line embryonic stem cell
28 chr1:224885800-224895200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr1:224886000-224886200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:224886000-224886200 Enhancers Fetal Brain Female brain
31 chr1:224886000-224888000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
32 chr1:224886000-224890200 Weak transcription iPS-18 Cell Line embryonic stem cell

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