The 2.0 version of rSNPBase

Variant report

Variant rs56879180
Chromosome Location chr1:224824800-224824801
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:224812800-224825200 Weak transcription HMEC breast
2 chr1:224812800-224828200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr1:224818400-224829400 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:224820400-224840000 Weak transcription Right Atrium heart
5 chr1:224820600-224825200 Weak transcription Fetal Lung lung
6 chr1:224820800-224825200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:224820800-224827600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
8 chr1:224821000-224824800 Weak transcription HSMMtube muscle
9 chr1:224822600-224825000 Weak transcription Fetal Brain Female brain
10 chr1:224822800-224825000 Enhancers Muscle Satellite Cultured Cells --
11 chr1:224823400-224825000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr1:224823400-224827000 Enhancers HSMM muscle
13 chr1:224823400-224827200 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr1:224823600-224825200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr1:224823600-224825200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:224823600-224825200 Weak transcription Pancreas Pancrea
17 chr1:224823600-224825400 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
18 chr1:224823800-224825000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr1:224823800-224825000 Weak transcription Osteobl bone
20 chr1:224823800-224825200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:224823800-224825200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
22 chr1:224824000-224825200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr1:224824000-224825400 Weak transcription Gastric stomach
24 chr1:224824000-224825400 Weak transcription NHLF lung
25 chr1:224824200-224825000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
26 chr1:224824200-224825200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
27 chr1:224824400-224824800 Weak transcription Cortex derived primary cultured neurospheres brain
28 chr1:224824400-224825200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:224824400-224825600 Weak transcription NHDF-Ad bronchial
30 chr1:224824400-224826400 Enhancers Dnd41 blood
31 chr1:224824400-224827800 Enhancers NH-A brain
32 chr1:224824600-224826400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
33 chr1:224824600-224826400 Enhancers Fetal Brain Male brain
34 chr1:224824800-224825800 Enhancers Cortex derived primary cultured neurospheres brain
35 chr1:224824800-224826600 Enhancers HSMMtube muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015