The 2.0 version of rSNPBase

Variant report

Variant rs58340674
Chromosome Location chr3:119710799-119710800
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119631000-119717000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr3:119656600-119718400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr3:119665800-119716800 Weak transcription HSMM muscle
4 chr3:119681200-119723200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr3:119687200-119716600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr3:119689000-119711800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr3:119689000-119722600 Weak transcription Gastric stomach
8 chr3:119692400-119717000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr3:119692400-119723200 Weak transcription Fetal Adrenal Gland Adrenal Gland
10 chr3:119693600-119732200 Weak transcription A549 lung
11 chr3:119700600-119722800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
12 chr3:119700800-119717000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr3:119701000-119720000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
14 chr3:119701000-119722600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr3:119701400-119712400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr3:119701800-119717200 Weak transcription Fetal Thymus thymus
17 chr3:119706000-119711000 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr3:119706000-119711400 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr3:119706000-119717000 Weak transcription Fetal Muscle Trunk muscle
20 chr3:119706200-119717000 Weak transcription Primary B cells from cord blood blood
21 chr3:119707400-119712000 Weak transcription Primary T helper cells PMA-I stimulated --
22 chr3:119707400-119716600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr3:119707600-119712000 Weak transcription Small Intestine intestine
24 chr3:119708200-119716800 Weak transcription Primary hematopoietic stem cells blood
25 chr3:119708800-119711400 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr3:119709000-119722600 Weak transcription Ovary ovary
27 chr3:119709200-119723000 Weak transcription Spleen Spleen
28 chr3:119709400-119716800 Weak transcription Primary monocytes fromperipheralblood blood
29 chr3:119709600-119717000 Weak transcription Left Ventricle heart
30 chr3:119709800-119711200 Enhancers Osteobl bone
31 chr3:119709800-119712600 Weak transcription Psoas Muscle Psoas
32 chr3:119710000-119710800 Enhancers Colon Smooth Muscle Colon
33 chr3:119710000-119710800 Enhancers NHEK skin
34 chr3:119710000-119712000 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr3:119710200-119710800 Weak transcription Duodenum Mucosa Duodenum
36 chr3:119710200-119711800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr3:119710200-119712400 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr3:119710200-119716400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr3:119710200-119716600 Weak transcription HMEC breast
40 chr3:119710200-119716800 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr3:119710200-119716800 Weak transcription Pancreatic Islets Pancreatic Islet
42 chr3:119710200-119719000 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr3:119710200-119722600 Weak transcription Stomach Mucosa stomach
44 chr3:119710200-119730800 Weak transcription Rectal Smooth Muscle rectum
45 chr3:119710400-119711800 Weak transcription Hela-S3 cervix
46 chr3:119710400-119712000 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr3:119710400-119712000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr3:119710400-119712400 Weak transcription NHDF-Ad bronchial
49 chr3:119710400-119716400 Weak transcription Monocytes-CD14+_RO01746 blood
50 chr3:119710400-119717000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell

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Last update: Aug 31, 2015