The 2.0 version of rSNPBase

Variant report

Variant rs58742584
Chromosome Location chr3:119709165-119709166
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:119631000-119717000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr3:119656600-119718400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr3:119665800-119716800 Weak transcription HSMM muscle
4 chr3:119681200-119723200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
5 chr3:119687200-119716600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
6 chr3:119689000-119710600 Weak transcription Primary T helper naive cells fromperipheralblood blood
7 chr3:119689000-119711800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
8 chr3:119689000-119722600 Weak transcription Gastric stomach
9 chr3:119692400-119717000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr3:119692400-119723200 Weak transcription Fetal Adrenal Gland Adrenal Gland
11 chr3:119693600-119732200 Weak transcription A549 lung
12 chr3:119696400-119709200 Weak transcription HMEC breast
13 chr3:119698400-119709400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr3:119700600-119722800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
15 chr3:119700800-119717000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr3:119701000-119720000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr3:119701000-119722600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr3:119701400-119712400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr3:119701800-119717200 Weak transcription Fetal Thymus thymus
20 chr3:119706000-119711000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr3:119706000-119711400 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr3:119706000-119717000 Weak transcription Fetal Muscle Trunk muscle
23 chr3:119706200-119717000 Weak transcription Primary B cells from cord blood blood
24 chr3:119706400-119709800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
25 chr3:119707400-119712000 Weak transcription Primary T helper cells PMA-I stimulated --
26 chr3:119707400-119716600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr3:119707600-119709800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr3:119707600-119712000 Weak transcription Small Intestine intestine
29 chr3:119708000-119709600 Enhancers Skeletal Muscle Female skeletal muscle
30 chr3:119708000-119710000 Enhancers Primary neutrophils fromperipheralblood blood
31 chr3:119708200-119716800 Weak transcription Primary hematopoietic stem cells blood
32 chr3:119708400-119709400 Enhancers Primary monocytes fromperipheralblood blood
33 chr3:119708400-119709600 Enhancers Monocytes-CD14+_RO01746 blood
34 chr3:119708400-119710400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr3:119708600-119709800 Enhancers Psoas Muscle Psoas
36 chr3:119708600-119710200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr3:119708800-119709600 Enhancers Left Ventricle heart
38 chr3:119708800-119711400 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr3:119709000-119709200 Enhancers Spleen Spleen
40 chr3:119709000-119709400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr3:119709000-119710200 Enhancers Sigmoid Colon Sigmoid Colon
42 chr3:119709000-119722600 Weak transcription Ovary ovary

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Last update: Aug 31, 2015