The 2.0 version of rSNPBase

Variant report

Variant rs58356308
Chromosome Location chr1:173716014-173716015
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173685000-173720800 Weak transcription Small Intestine intestine
2 chr1:173685200-173724600 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:173685400-173725000 Weak transcription Skeletal Muscle Male skeletal muscle
4 chr1:173685800-173724800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
5 chr1:173686800-173721600 Weak transcription HUVEC blood vessel
6 chr1:173686800-173721800 Weak transcription Colon Smooth Muscle Colon
7 chr1:173686800-173725400 Weak transcription Right Ventricle heart
8 chr1:173694600-173724800 Weak transcription HMEC breast
9 chr1:173694800-173718400 Weak transcription NHDF-Ad bronchial
10 chr1:173695000-173718000 Weak transcription A549 lung
11 chr1:173695400-173721600 Weak transcription Brain Cingulate Gyrus brain
12 chr1:173695400-173726000 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:173695600-173721000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr1:173695800-173725000 Weak transcription Rectal Smooth Muscle rectum
15 chr1:173695800-173726000 Weak transcription Esophagus oesophagus
16 chr1:173695800-173729800 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr1:173696200-173726000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:173696600-173721000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr1:173696600-173723000 Weak transcription iPS-18 Cell Line embryonic stem cell
20 chr1:173698000-173724800 Weak transcription HUES6 Cell Line embryonic stem cell
21 chr1:173699600-173725800 Weak transcription Fetal Kidney kidney
22 chr1:173703400-173720800 Weak transcription Brain Inferior Temporal Lobe brain
23 chr1:173703400-173721400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:173703400-173725000 Weak transcription Colonic Mucosa Colon
25 chr1:173703400-173725000 Weak transcription Psoas Muscle Psoas
26 chr1:173703400-173726000 Weak transcription Aorta Aorta
27 chr1:173703400-173726000 Weak transcription Spleen Spleen
28 chr1:173703400-173726000 Weak transcription NHEK skin
29 chr1:173703600-173724400 Weak transcription Brain Substantia Nigra brain
30 chr1:173703600-173724400 Weak transcription GM12878-XiMat blood
31 chr1:173703600-173724400 Weak transcription HSMMtube muscle
32 chr1:173703600-173724800 Weak transcription Pancreas Pancrea
33 chr1:173703800-173728200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:173704200-173722200 Weak transcription Osteobl bone
35 chr1:173704200-173725000 Weak transcription NHLF lung
36 chr1:173704400-173721400 Weak transcription HUES64 Cell Line embryonic stem cell
37 chr1:173704400-173722200 Weak transcription HUES48 Cell Line embryonic stem cell
38 chr1:173704400-173724400 Weak transcription Gastric stomach
39 chr1:173704400-173725000 Weak transcription iPS-20b Cell Line embryonic stem cell
40 chr1:173704400-173725200 Weak transcription H1 Cell Line embryonic stem cell
41 chr1:173705000-173721400 Weak transcription NH-A brain
42 chr1:173705000-173721600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
43 chr1:173705000-173723600 Weak transcription Lung lung
44 chr1:173705200-173721000 Weak transcription Brain Hippocampus Middle brain
45 chr1:173705400-173722000 Weak transcription Thymus Thymus
46 chr1:173705400-173724800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
47 chr1:173705600-173721600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr1:173705600-173724800 Weak transcription Brain Angular Gyrus brain
49 chr1:173705800-173720800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr1:173705800-173725400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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Last update: Aug 31, 2015