Variant report

Variant	rs73031308
Chromosome Location	chr1:173579571-173579572
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:173576948..173579890-chr1:173793807..173795383,2	K562	blood:

Variant related genes	Relation type
ENSG00000120334	Chromatin interaction

Extended variants
information (count: 45 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:45)

rs_ID	r²[population]
rs2126126	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs35515638	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56660187	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56802207	1.00[AMR][1000 genomes]
rs57520670	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58193236	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58356308	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60228238	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60656154	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61286800	0.83[AFR][1000 genomes]
rs61628721	1.00[AMR][1000 genomes]
rs6425260	1.00[AMR][1000 genomes]
rs6663103	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6674573	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6694637	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73023556	1.00[AMR][1000 genomes]
rs73023565	1.00[AMR][1000 genomes]
rs73023571	1.00[AMR][1000 genomes]
rs73023587	1.00[AMR][1000 genomes]
rs73023590	1.00[AMR][1000 genomes]
rs73025450	1.00[AMR][1000 genomes]
rs73025453	1.00[AMR][1000 genomes]
rs73031331	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73033104	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73033137	0.82[AFR][1000 genomes]
rs73033138	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73035115	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73035123	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73035125	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73035130	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73035152	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73035157	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73035162	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73037024	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73037030	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73037052	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73037062	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7512487	1.00[AMR][1000 genomes]
rs7516013	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7531338	1.00[AMR][1000 genomes]
rs7534260	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7534982	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7537349	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7542542	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7542780	0.85[AFR][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:173573400-173586000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr1:173575600-173580600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr1:173578200-173580800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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