The 2.0 version of rSNPBase

Variant report

Variant rs73023565
Chromosome Location chr1:173394294-173394295
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173372000-173398600 Weak transcription Brain Substantia Nigra brain
2 chr1:173375200-173398600 Weak transcription Esophagus oesophagus
3 chr1:173376200-173429000 Weak transcription Gastric stomach
4 chr1:173376400-173400800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:173378400-173398400 Weak transcription Brain Angular Gyrus brain
6 chr1:173379000-173398400 Weak transcription Breast Myoepithelial Primary Cells Breast
7 chr1:173380200-173398400 Weak transcription Brain Hippocampus Middle brain
8 chr1:173380200-173398600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
9 chr1:173380200-173398600 Weak transcription Psoas Muscle Psoas
10 chr1:173380400-173398400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr1:173380400-173398600 Weak transcription Thymus Thymus
12 chr1:173380400-173398800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:173383000-173398600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:173385600-173398600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:173385600-173398600 Weak transcription Spleen Spleen
16 chr1:173386000-173397800 Weak transcription Fetal Muscle Trunk muscle
17 chr1:173387600-173429000 Weak transcription Lung lung
18 chr1:173387800-173398400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr1:173387800-173398600 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr1:173388000-173398400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:173388000-173398400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
22 chr1:173388000-173398600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
23 chr1:173389600-173394400 Weak transcription A549 lung
24 chr1:173389600-173394600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr1:173389600-173395200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:173389600-173395400 Weak transcription Colonic Mucosa Colon
27 chr1:173389600-173398000 Weak transcription Fetal Stomach stomach
28 chr1:173389600-173398000 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr1:173389600-173398400 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr1:173389600-173398400 Weak transcription Primary B cells from cord blood blood
31 chr1:173389600-173398400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr1:173389600-173398400 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:173389600-173398400 Weak transcription Rectal Smooth Muscle rectum
34 chr1:173389600-173398400 Weak transcription NH-A brain
35 chr1:173389600-173398600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:173389600-173398600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr1:173389600-173398600 Weak transcription Duodenum Mucosa Duodenum
38 chr1:173389600-173398600 Weak transcription Left Ventricle heart
39 chr1:173389600-173399200 Weak transcription Pancreas Pancrea
40 chr1:173389600-173400600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
41 chr1:173389800-173398000 Weak transcription Stomach Smooth Muscle stomach
42 chr1:173389800-173398400 Weak transcription Fetal Lung lung
43 chr1:173390000-173397800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:173390000-173398200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:173390000-173398400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr1:173390000-173398400 Weak transcription Primary T helper cells PMA-I stimulated --
47 chr1:173390000-173398400 Weak transcription Primary T helper cells fromperipheralblood blood
48 chr1:173390000-173398600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr1:173390000-173398600 Weak transcription HUVEC blood vessel
50 chr1:173391400-173396600 Enhancers Fetal Muscle Leg muscle

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Last update: Aug 31, 2015