The 2.0 version of rSNPBase

Variant report

Variant rs61628721
Chromosome Location chr1:173424474-173424475
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:103 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173376200-173429000 Weak transcription Gastric stomach
2 chr1:173387600-173429000 Weak transcription Lung lung
3 chr1:173391800-173429000 Weak transcription Ovary ovary
4 chr1:173400400-173429000 Weak transcription Monocytes-CD14+_RO01746 blood
5 chr1:173400600-173428800 Weak transcription Fetal Stomach stomach
6 chr1:173400800-173429000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr1:173400800-173429000 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr1:173401000-173428800 Weak transcription Brain Hippocampus Middle brain
9 chr1:173401000-173429000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr1:173401000-173429000 Weak transcription Left Ventricle heart
11 chr1:173401800-173429000 Weak transcription Primary B cells from cord blood blood
12 chr1:173404200-173429000 Weak transcription Adipose Nuclei Adipose
13 chr1:173404200-173429000 Weak transcription Right Ventricle heart
14 chr1:173408800-173429000 Weak transcription Brain Substantia Nigra brain
15 chr1:173408800-173429000 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr1:173409000-173428800 Weak transcription Primary monocytes fromperipheralblood blood
17 chr1:173409000-173428800 Weak transcription Primary T regulatory cells fromperipheralblood blood
18 chr1:173409000-173429200 Weak transcription Aorta Aorta
19 chr1:173411400-173427000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr1:173411600-173428800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:173413400-173429200 Weak transcription Placenta Placenta
22 chr1:173414600-173429000 Weak transcription Thymus Thymus
23 chr1:173415600-173429000 Weak transcription Brain Angular Gyrus brain
24 chr1:173416000-173429000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr1:173416200-173429000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
26 chr1:173416400-173429000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
27 chr1:173416400-173430000 Weak transcription Fetal Lung lung
28 chr1:173416600-173429400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr1:173416800-173429000 Weak transcription Fetal Muscle Leg muscle
30 chr1:173416800-173430000 Weak transcription Primary hematopoietic stem cells blood
31 chr1:173416800-173430200 Weak transcription GM12878-XiMat blood
32 chr1:173418800-173429000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr1:173418800-173429000 Weak transcription H9 Cell Line embryonic stem cell
34 chr1:173418800-173429000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:173419000-173429000 Weak transcription Breast Myoepithelial Primary Cells Breast
36 chr1:173419000-173429200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr1:173419000-173432000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
38 chr1:173419000-173439000 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr1:173419200-173428800 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr1:173419400-173429000 Weak transcription H1 Cell Line embryonic stem cell
41 chr1:173419800-173429000 Weak transcription Brain Inferior Temporal Lobe brain
42 chr1:173421000-173432200 Weak transcription Fetal Brain Male brain
43 chr1:173421400-173429000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr1:173421400-173429000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:173421400-173429200 Weak transcription Skeletal Muscle Male skeletal muscle
46 chr1:173421400-173429200 Weak transcription HMEC breast
47 chr1:173421400-173430000 Weak transcription Skeletal Muscle Female skeletal muscle
48 chr1:173421400-173434000 Weak transcription Psoas Muscle Psoas
49 chr1:173421600-173429000 Weak transcription Rectal Smooth Muscle rectum
50 chr1:173421600-173429600 Weak transcription Pancreatic Islets Pancreatic Islet

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Last update: Aug 31, 2015