The 2.0 version of rSNPBase

Variant report

Variant rs73023590
Chromosome Location chr1:173417247-173417248
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:68 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173376200-173429000 Weak transcription Gastric stomach
2 chr1:173387600-173429000 Weak transcription Lung lung
3 chr1:173391800-173429000 Weak transcription Ovary ovary
4 chr1:173399400-173424200 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:173400200-173421000 Weak transcription Psoas Muscle Psoas
6 chr1:173400200-173422800 Weak transcription NH-A brain
7 chr1:173400400-173429000 Weak transcription Monocytes-CD14+_RO01746 blood
8 chr1:173400600-173428800 Weak transcription Fetal Stomach stomach
9 chr1:173400800-173420600 Weak transcription Hela-S3 cervix
10 chr1:173400800-173421000 Weak transcription Colon Smooth Muscle Colon
11 chr1:173400800-173422800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr1:173400800-173429000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
13 chr1:173400800-173429000 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr1:173401000-173418000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:173401000-173421000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
16 chr1:173401000-173421000 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:173401000-173422800 Weak transcription Muscle Satellite Cultured Cells --
18 chr1:173401000-173428800 Weak transcription Brain Hippocampus Middle brain
19 chr1:173401000-173429000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr1:173401000-173429000 Weak transcription Left Ventricle heart
21 chr1:173401200-173422800 Weak transcription HSMM muscle
22 chr1:173401800-173429000 Weak transcription Primary B cells from cord blood blood
23 chr1:173404200-173429000 Weak transcription Adipose Nuclei Adipose
24 chr1:173404200-173429000 Weak transcription Right Ventricle heart
25 chr1:173404400-173423000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr1:173408800-173422800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
27 chr1:173408800-173422800 Weak transcription HSMMtube muscle
28 chr1:173408800-173422800 Weak transcription K562 blood
29 chr1:173408800-173429000 Weak transcription Brain Substantia Nigra brain
30 chr1:173408800-173429000 Weak transcription Fetal Adrenal Gland Adrenal Gland
31 chr1:173409000-173428800 Weak transcription Primary monocytes fromperipheralblood blood
32 chr1:173409000-173428800 Weak transcription Primary T regulatory cells fromperipheralblood blood
33 chr1:173409000-173429200 Weak transcription Aorta Aorta
34 chr1:173411400-173427000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr1:173411600-173428800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr1:173413400-173429200 Weak transcription Placenta Placenta
37 chr1:173414600-173429000 Weak transcription Thymus Thymus
38 chr1:173415000-173417400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
39 chr1:173415000-173417600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr1:173415000-173418200 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr1:173415000-173422800 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr1:173415000-173424200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
43 chr1:173415000-173424200 Weak transcription Primary T helper naive cells fromperipheralblood blood
44 chr1:173415200-173417600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:173415600-173429000 Weak transcription Brain Angular Gyrus brain
46 chr1:173416000-173418200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
47 chr1:173416000-173420800 Weak transcription Liver Liver
48 chr1:173416000-173429000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
49 chr1:173416200-173417400 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
50 chr1:173416200-173423600 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015