The 2.0 version of rSNPBase

Variant report

Variant rs7512487
Chromosome Location chr1:173391895-173391896
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:89 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:173372000-173398600 Weak transcription Brain Substantia Nigra brain
2 chr1:173375200-173398600 Weak transcription Esophagus oesophagus
3 chr1:173376200-173429000 Weak transcription Gastric stomach
4 chr1:173376400-173400800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:173376600-173392600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr1:173378400-173398400 Weak transcription Brain Angular Gyrus brain
7 chr1:173379000-173398400 Weak transcription Breast Myoepithelial Primary Cells Breast
8 chr1:173379200-173393200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:173380200-173398400 Weak transcription Brain Hippocampus Middle brain
10 chr1:173380200-173398600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr1:173380200-173398600 Weak transcription Psoas Muscle Psoas
12 chr1:173380400-173392600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr1:173380400-173398400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr1:173380400-173398600 Weak transcription Thymus Thymus
15 chr1:173380400-173398800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr1:173383000-173398600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:173385600-173398600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr1:173385600-173398600 Weak transcription Spleen Spleen
19 chr1:173386000-173397800 Weak transcription Fetal Muscle Trunk muscle
20 chr1:173387600-173429000 Weak transcription Lung lung
21 chr1:173387800-173398400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr1:173387800-173398600 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr1:173388000-173398400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr1:173388000-173398400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr1:173388000-173398600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
26 chr1:173389600-173392000 Weak transcription HUES64 Cell Line embryonic stem cell
27 chr1:173389600-173392600 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr1:173389600-173392600 Weak transcription NHEK skin
29 chr1:173389600-173393000 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr1:173389600-173393200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:173389600-173393400 Weak transcription Placenta Amnion Placenta Amnion
32 chr1:173389600-173393600 Weak transcription Hela-S3 cervix
33 chr1:173389600-173394200 Weak transcription H9 Cell Line embryonic stem cell
34 chr1:173389600-173394200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
35 chr1:173389600-173394200 Weak transcription Muscle Satellite Cultured Cells --
36 chr1:173389600-173394400 Weak transcription A549 lung
37 chr1:173389600-173394600 Weak transcription Sigmoid Colon Sigmoid Colon
38 chr1:173389600-173395200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr1:173389600-173395400 Weak transcription Colonic Mucosa Colon
40 chr1:173389600-173398000 Weak transcription Fetal Stomach stomach
41 chr1:173389600-173398000 Weak transcription Skeletal Muscle Female skeletal muscle
42 chr1:173389600-173398400 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr1:173389600-173398400 Weak transcription Primary B cells from cord blood blood
44 chr1:173389600-173398400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr1:173389600-173398400 Weak transcription Brain Inferior Temporal Lobe brain
46 chr1:173389600-173398400 Weak transcription Rectal Smooth Muscle rectum
47 chr1:173389600-173398400 Weak transcription NH-A brain
48 chr1:173389600-173398600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr1:173389600-173398600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
50 chr1:173389600-173398600 Weak transcription Duodenum Mucosa Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015