The 2.0 version of rSNPBase

Variant report

Variant rs58388376
Chromosome Location chr15:57422705-57422706
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:57382600-57423800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr15:57386400-57426600 Weak transcription Primary T cells fromperipheralblood blood
3 chr15:57386600-57424600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr15:57387000-57430000 Weak transcription Placenta Placenta
5 chr15:57387200-57425400 Weak transcription Primary T helper cells fromperipheralblood blood
6 chr15:57387600-57442400 Weak transcription Fetal Intestine Large intestine
7 chr15:57399400-57424600 Weak transcription Primary T helper cells PMA-I stimulated --
8 chr15:57403000-57424600 Weak transcription Primary T helper naive cells from peripheral blood blood
9 chr15:57403800-57425200 Weak transcription H9 Cell Line embryonic stem cell
10 chr15:57404600-57425000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
11 chr15:57406800-57425000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr15:57406800-57425400 Weak transcription Pancreas Pancrea
13 chr15:57406800-57425600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
14 chr15:57406800-57425600 Weak transcription Fetal Muscle Trunk muscle
15 chr15:57406800-57426400 Weak transcription Colonic Mucosa Colon
16 chr15:57406800-57426600 Weak transcription Psoas Muscle Psoas
17 chr15:57407600-57425600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
18 chr15:57410400-57425400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr15:57410600-57424800 Weak transcription HSMMtube muscle
20 chr15:57410600-57425000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr15:57410600-57425400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr15:57410600-57426600 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr15:57410600-57440800 Weak transcription Ovary ovary
24 chr15:57410800-57425000 Weak transcription Primary T regulatory cells fromperipheralblood blood
25 chr15:57410800-57425000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr15:57410800-57425600 Weak transcription HMEC breast
27 chr15:57411000-57428200 Weak transcription NHLF lung
28 chr15:57411000-57430400 Weak transcription NH-A brain
29 chr15:57411400-57426200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
30 chr15:57411600-57424200 Weak transcription Brain Germinal Matrix brain
31 chr15:57411800-57424200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr15:57412400-57425000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr15:57412600-57424800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr15:57413600-57425400 Weak transcription Primary B cells from peripheral blood blood
35 chr15:57413800-57426600 Weak transcription Duodenum Mucosa Duodenum
36 chr15:57413800-57428800 Weak transcription Gastric stomach
37 chr15:57414000-57424200 Strong transcription Fetal Thymus thymus
38 chr15:57414000-57425400 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr15:57414000-57425400 Weak transcription Left Ventricle heart
40 chr15:57414000-57425400 Weak transcription Small Intestine intestine
41 chr15:57414600-57423800 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr15:57415000-57425000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr15:57415000-57427800 Weak transcription Colon Smooth Muscle Colon
44 chr15:57415000-57428400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr15:57415000-57438800 Weak transcription Primary monocytes fromperipheralblood blood
46 chr15:57415200-57425000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
47 chr15:57415200-57425600 Weak transcription Aorta Aorta
48 chr15:57415400-57423000 Weak transcription Primary hematopoietic stem cells blood
49 chr15:57415400-57423200 Weak transcription Brain Cingulate Gyrus brain
50 chr15:57415400-57425200 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015