The 2.0 version of rSNPBase

Variant report

Variant rs58521602
Chromosome Location chr4:99930740-99930741
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:99918200-99931000 Weak transcription Primary monocytes fromperipheralblood blood
2 chr4:99918200-99931400 Weak transcription Fetal Muscle Leg muscle
3 chr4:99918200-99935400 Weak transcription Ovary ovary
4 chr4:99918200-99935800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
5 chr4:99918200-99938000 Weak transcription NHDF-Ad bronchial
6 chr4:99918600-99937800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
7 chr4:99918600-99938600 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr4:99918800-99932200 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr4:99918800-99937800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr4:99919200-99940000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr4:99919200-99942000 Weak transcription Primary T helper naive cells from peripheral blood blood
12 chr4:99919400-99931000 Weak transcription Fetal Thymus thymus
13 chr4:99920000-99937800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr4:99924000-99931200 Weak transcription Fetal Intestine Small intestine
15 chr4:99924000-99931600 Weak transcription K562 blood
16 chr4:99924200-99941600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr4:99924200-99943600 Weak transcription Gastric stomach
18 chr4:99924600-99935400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr4:99924600-99942000 Weak transcription Fetal Lung lung
20 chr4:99925200-99932200 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr4:99925400-99940000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
22 chr4:99925600-99939800 Weak transcription Thymus Thymus
23 chr4:99925600-99941200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
24 chr4:99925600-99941200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr4:99925800-99931400 Weak transcription Left Ventricle heart
26 chr4:99925800-99938800 Weak transcription Fetal Intestine Large intestine
27 chr4:99928400-99941400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr4:99928600-99931000 Weak transcription H1 Cell Line embryonic stem cell
29 chr4:99928600-99933600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
30 chr4:99928600-99942400 Weak transcription Esophagus oesophagus
31 chr4:99929000-99935000 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr4:99929200-99930800 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr4:99929200-99932400 Weak transcription Fetal Heart heart
34 chr4:99929200-99940600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr4:99929200-99940800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr4:99929600-99930800 Strong transcription iPS-20b Cell Line embryonic stem cell
37 chr4:99929600-99931200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr4:99929600-99934000 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr4:99929600-99934200 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr4:99929800-99935800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr4:99930200-99930800 ZNF genes & repeats Cortex derived primary cultured neurospheres brain
42 chr4:99930200-99931000 Strong transcription Primary hematopoietic stem cells blood
43 chr4:99930200-99931200 ZNF genes & repeats Dnd41 blood
44 chr4:99930200-99931400 ZNF genes & repeats Primary T cells from cord blood blood
45 chr4:99930200-99931600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr4:99930200-99934200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr4:99930200-99938000 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
48 chr4:99930400-99930800 Enhancers Primary T helper cells PMA-I stimulated --
49 chr4:99930400-99931400 ZNF genes & repeats Primary B cells from cord blood blood
50 chr4:99930400-99932000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood

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Last update: Aug 31, 2015