The 2.0 version of rSNPBase

Variant report

Variant rs58544367
Chromosome Location chr6:128350569-128350570
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:46 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:128289000-128431000 Weak transcription Psoas Muscle Psoas
2 chr6:128293600-128374400 Weak transcription Pancreas Pancrea
3 chr6:128298000-128352600 Weak transcription Rectal Smooth Muscle rectum
4 chr6:128305200-128353000 Weak transcription Left Ventricle heart
5 chr6:128307800-128370800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr6:128311600-128387200 Weak transcription NH-A brain
7 chr6:128311800-128378400 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr6:128314000-128367400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr6:128320800-128357800 Weak transcription Fetal Intestine Small intestine
10 chr6:128320800-128388200 Weak transcription NHEK skin
11 chr6:128326400-128351000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr6:128326600-128356600 Weak transcription HSMM muscle
13 chr6:128326600-128388200 Weak transcription HMEC breast
14 chr6:128329200-128353000 Weak transcription HepG2 liver
15 chr6:128330200-128353000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
16 chr6:128337400-128378400 Weak transcription Sigmoid Colon Sigmoid Colon
17 chr6:128341200-128353200 Weak transcription Fetal Heart heart
18 chr6:128341200-128374400 Weak transcription HSMMtube muscle
19 chr6:128341400-128351200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:128341800-128350800 Weak transcription Primary B cells from cord blood blood
21 chr6:128342200-128371000 Weak transcription Liver Liver
22 chr6:128342600-128351000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr6:128342600-128388600 Weak transcription Fetal Brain Female brain
24 chr6:128343600-128353000 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr6:128344200-128352800 Weak transcription Fetal Intestine Large intestine
26 chr6:128344600-128369200 Weak transcription Ovary ovary
27 chr6:128345000-128353000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr6:128345800-128352400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:128346800-128353000 Weak transcription ES-I3 Cell Line embryonic stem cell
30 chr6:128346800-128353000 Weak transcription Aorta Aorta
31 chr6:128347000-128351000 Weak transcription iPS-15b Cell Line embryonic stem cell
32 chr6:128347000-128353200 Weak transcription H1 Cell Line embryonic stem cell
33 chr6:128347000-128374400 Weak transcription Esophagus oesophagus
34 chr6:128347000-128405200 Weak transcription Lung lung
35 chr6:128347600-128353000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr6:128348400-128353200 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr6:128348600-128353000 Weak transcription Duodenum Mucosa Duodenum
38 chr6:128348800-128353200 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr6:128349400-128352800 Weak transcription Osteobl bone
40 chr6:128349800-128351000 Weak transcription Thymus Thymus
41 chr6:128349800-128352200 Weak transcription Primary T cells from cord blood blood
42 chr6:128350000-128370000 Weak transcription Placenta Placenta
43 chr6:128350000-128401000 Weak transcription Small Intestine intestine
44 chr6:128350200-128353000 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr6:128350200-128355200 Enhancers Fetal Thymus thymus
46 chr6:128350400-128374200 Weak transcription Gastric stomach

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Last update: Aug 31, 2015