The 2.0 version of rSNPBase

Variant report

Variant rs58685133
Chromosome Location chr12:49098141-49098142
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:49076600-49109000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr12:49081000-49101000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
3 chr12:49081400-49104000 Strong transcription Hela-S3 cervix
4 chr12:49081600-49099800 Strong transcription Primary T helper cells PMA-I stimulated --
5 chr12:49081600-49103800 Strong transcription Dnd41 blood
6 chr12:49081600-49107200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr12:49081600-49107600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr12:49081600-49108400 Strong transcription HUES48 Cell Line embryonic stem cell
9 chr12:49081800-49099400 Strong transcription Primary T helper cells fromperipheralblood blood
10 chr12:49082000-49104000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr12:49082000-49107600 Strong transcription Primary B cells from peripheral blood blood
12 chr12:49082200-49100800 Strong transcription Primary T regulatory cells fromperipheralblood blood
13 chr12:49082200-49107200 Strong transcription Liver Liver
14 chr12:49082200-49107400 Strong transcription Placenta Placenta
15 chr12:49082200-49108000 Strong transcription iPS-20b Cell Line embryonic stem cell
16 chr12:49082200-49108400 Strong transcription Primary monocytes fromperipheralblood blood
17 chr12:49082200-49108600 Strong transcription HUES6 Cell Line embryonic stem cell
18 chr12:49082200-49108600 Strong transcription Primary hematopoietic stem cells short term culture blood
19 chr12:49082200-49108800 Strong transcription HUES64 Cell Line embryonic stem cell
20 chr12:49082400-49100200 Strong transcription Primary T cells fromperipheralblood blood
21 chr12:49082600-49107600 Strong transcription Fetal Thymus thymus
22 chr12:49082800-49101800 Strong transcription H1 Cell Line embryonic stem cell
23 chr12:49088200-49107200 Weak transcription Small Intestine intestine
24 chr12:49088200-49107400 Weak transcription Psoas Muscle Psoas
25 chr12:49088200-49107600 Weak transcription Stomach Mucosa stomach
26 chr12:49089800-49109400 Weak transcription ES-WA7 Cell Line embryonic stem cell
27 chr12:49090000-49098400 Weak transcription Ovary ovary
28 chr12:49090000-49107200 Strong transcription Fetal Adrenal Gland Adrenal Gland
29 chr12:49090000-49107600 Weak transcription Brain Angular Gyrus brain
30 chr12:49090000-49107800 Weak transcription Fetal Heart heart
31 chr12:49090000-49108400 Weak transcription Fetal Brain Male brain
32 chr12:49090600-49098600 Weak transcription NHLF lung
33 chr12:49091800-49103400 Strong transcription Breast Myoepithelial Primary Cells Breast
34 chr12:49091800-49104800 Strong transcription GM12878-XiMat blood
35 chr12:49091800-49107400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
36 chr12:49092800-49100800 Strong transcription Cortex derived primary cultured neurospheres brain
37 chr12:49093400-49102800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
38 chr12:49093400-49108000 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr12:49094800-49098800 Weak transcription NHDF-Ad bronchial
40 chr12:49095000-49099200 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr12:49095000-49099800 Strong transcription Fetal Intestine Small intestine
42 chr12:49095000-49108600 Strong transcription Fetal Stomach stomach
43 chr12:49095200-49103400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
44 chr12:49095400-49100200 Strong transcription Primary T helper 17 cells PMA-I stimulated --
45 chr12:49095600-49099200 Strong transcription Gastric stomach
46 chr12:49095600-49102200 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr12:49095600-49102800 Strong transcription Thymus Thymus
48 chr12:49095600-49103000 Strong transcription Sigmoid Colon Sigmoid Colon
49 chr12:49095600-49107400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr12:49095600-49107800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015