The 2.0 version of rSNPBase

Variant report

Variant rs74089330
Chromosome Location chr12:49034835-49034836
allele A/C/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:49027600-49046600 Weak transcription Placenta Amnion Placenta Amnion
2 chr12:49027800-49036600 Weak transcription Fetal Brain Male brain
3 chr12:49028200-49045000 Weak transcription Colonic Mucosa Colon
4 chr12:49028400-49038000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr12:49028600-49037600 Weak transcription HSMM muscle
6 chr12:49030000-49047200 Weak transcription Esophagus oesophagus
7 chr12:49030200-49036800 Weak transcription A549 lung
8 chr12:49031000-49036600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr12:49031400-49037400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr12:49031400-49043800 Weak transcription Muscle Satellite Cultured Cells --
11 chr12:49031800-49037000 Weak transcription HSMMtube muscle
12 chr12:49032200-49036600 Weak transcription Adipose Nuclei Adipose
13 chr12:49033200-49036800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr12:49033400-49036800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr12:49033600-49036600 Weak transcription Osteobl bone
16 chr12:49033800-49035000 Enhancers K562 blood
17 chr12:49033800-49039000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr12:49033800-49045200 Weak transcription Spleen Spleen
19 chr12:49034000-49036600 Weak transcription Duodenum Mucosa Duodenum
20 chr12:49034200-49036800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr12:49034400-49035800 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
22 chr12:49034400-49042400 Weak transcription Thymus Thymus
23 chr12:49034600-49035600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
24 chr12:49034600-49036600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr12:49034600-49036800 ZNF genes & repeats Fetal Adrenal Gland Adrenal Gland
26 chr12:49034600-49045800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
27 chr12:49034800-49036800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr12:49034800-49036800 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr12:49034800-49036800 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr12:49034800-49038000 Weak transcription Primary T cells from cord blood blood
31 chr12:49034800-49041200 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr12:49034800-49041800 Weak transcription Sigmoid Colon Sigmoid Colon
33 chr12:49034800-49044400 Weak transcription NHEK skin
34 chr12:49034800-49045200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
35 chr12:49034800-49045400 Weak transcription NHDF-Ad bronchial

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Last update: Aug 31, 2015