Variant report

Variant	rs58692102
Chromosome Location	chr7:136426484-136426485
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs59103221	1.00[AMR][1000 genomes]
rs59580970	1.00[AMR][1000 genomes]
rs61093667	1.00[AMR][1000 genomes]
rs73443517	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73443599	1.00[AMR][1000 genomes]
rs73445249	1.00[AMR][1000 genomes]
rs73457645	1.00[AMR][1000 genomes]
rs73459634	1.00[AMR][1000 genomes]
rs73459657	1.00[AMR][1000 genomes]
rs73459662	1.00[AMR][1000 genomes]
rs73459663	1.00[AMR][1000 genomes]
rs73459665	1.00[AMR][1000 genomes]
rs73459667	1.00[AMR][1000 genomes]
rs73459677	1.00[AMR][1000 genomes]
rs73459684	1.00[AMR][1000 genomes]
rs73459697	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518439	chr7:136134265-136452082	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv3374876	chr7:136413245-136480051	Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136425600-136426800	Weak transcription	Colon Smooth Muscle	Colon
2	chr7:136425800-136428000	Weak transcription	Fetal Heart	heart
3	chr7:136426400-136427200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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