Variant report

Variant	rs61093667
Chromosome Location	chr7:136384578-136384579
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 22 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs57351908	0.93[AFR][1000 genomes]
rs58692102	1.00[AMR][1000 genomes]
rs59103221	1.00[AMR][1000 genomes]
rs59580970	1.00[AMR][1000 genomes]
rs59789111	0.90[AFR][1000 genomes]
rs73443517	1.00[AMR][1000 genomes]
rs73443599	1.00[AMR][1000 genomes]
rs73445249	1.00[AMR][1000 genomes]
rs73457645	1.00[AMR][1000 genomes]
rs73459634	1.00[AMR][1000 genomes]
rs73459657	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73459662	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73459663	1.00[AMR][1000 genomes]
rs73459665	1.00[AMR][1000 genomes]
rs73459667	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73459677	1.00[AMR][1000 genomes]
rs73459684	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73459686	0.87[AFR][1000 genomes]
rs73459697	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv518439	chr7:136134265-136452082	Enhancers Weak transcription Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv508484	chr7:136333249-136384790	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	esv3382323	chr7:136384394-136384956	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136381600-136384600	Enhancers	Fetal Heart	heart
2	chr7:136382400-136384600	Enhancers	Colon Smooth Muscle	Colon

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links