Variant report

Variant	rs59580970
Chromosome Location	chr7:136508445-136508446
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs58692102	1.00[AMR][1000 genomes]
rs59103221	1.00[AMR][1000 genomes]
rs61093667	1.00[AMR][1000 genomes]
rs73443517	1.00[AMR][1000 genomes]
rs73443599	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73445249	1.00[AMR][1000 genomes]
rs73447191	1.00[AMR][1000 genomes]
rs73457645	1.00[AMR][1000 genomes]
rs73459634	1.00[AMR][1000 genomes]
rs73459657	1.00[AMR][1000 genomes]
rs73459662	1.00[AMR][1000 genomes]
rs73459663	1.00[AMR][1000 genomes]
rs73459665	1.00[AMR][1000 genomes]
rs73459667	1.00[AMR][1000 genomes]
rs73459677	1.00[AMR][1000 genomes]
rs73459684	1.00[AMR][1000 genomes]
rs73459697	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029192	chr7:136433278-137147566	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:136508200-136509400	Enhancers	Fetal Heart	heart

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links