The 2.0 version of rSNPBase

Variant report

Variant rs58756661
Chromosome Location chr5:49732671-49732672
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:41 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:49720400-49736400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr5:49720400-49736400 Weak transcription Spleen Spleen
3 chr5:49723600-49735200 Enhancers Primary T killer naive cells fromperipheralblood blood
4 chr5:49724000-49733400 Enhancers Primary T helper naive cells from peripheral blood blood
5 chr5:49724200-49735800 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr5:49724800-49732800 Enhancers Primary neutrophils fromperipheralblood blood
7 chr5:49726400-49735000 Enhancers Primary T regulatory cells fromperipheralblood blood
8 chr5:49727200-49734400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr5:49727200-49736000 Weak transcription HSMM muscle
10 chr5:49727400-49735000 Enhancers Monocytes-CD14+_RO01746 blood
11 chr5:49727400-49735200 Weak transcription Fetal Thymus thymus
12 chr5:49727600-49735000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr5:49727600-49735800 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr5:49727800-49736400 Weak transcription Muscle Satellite Cultured Cells --
15 chr5:49728000-49735800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr5:49728200-49736000 Enhancers Primary monocytes fromperipheralblood blood
17 chr5:49728600-49735200 Weak transcription NHEK skin
18 chr5:49728800-49733600 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr5:49729200-49735000 Weak transcription Primary hematopoietic stem cells blood
20 chr5:49729400-49733400 Enhancers Primary T helper 17 cells PMA-I stimulated --
21 chr5:49730000-49735000 Enhancers Primary T helper cells fromperipheralblood blood
22 chr5:49730400-49735000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr5:49730600-49734000 Weak transcription Primary B cells from cord blood blood
24 chr5:49730600-49735200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr5:49730800-49733000 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr5:49731400-49734000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr5:49731400-49735000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr5:49731400-49735000 Enhancers Primary T helper cells PMA-I stimulated --
29 chr5:49731400-49735200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
30 chr5:49731400-49735200 Weak transcription Duodenum Mucosa Duodenum
31 chr5:49731400-49735400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
32 chr5:49731400-49735600 Weak transcription Thymus Thymus
33 chr5:49731600-49736000 Weak transcription Small Intestine intestine
34 chr5:49731800-49736000 Weak transcription Sigmoid Colon Sigmoid Colon
35 chr5:49732200-49733200 Genic enhancers Primary T cells fromperipheralblood blood
36 chr5:49732400-49733000 Genic enhancers Primary hematopoietic stem cells short term culture blood
37 chr5:49732400-49733200 Enhancers Primary Natural Killer cells fromperipheralblood blood
38 chr5:49732400-49735000 Weak transcription Primary T cells from cord blood blood
39 chr5:49732600-49733000 Enhancers Dnd41 blood
40 chr5:49732600-49733200 Enhancers Primary B cells from peripheral blood blood
41 chr5:49732600-49735200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015