The 2.0 version of rSNPBase

Variant report

Variant rs62365896
Chromosome Location chr5:49718077-49718078
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:49682000-49719000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
2 chr5:49690200-49723600 Weak transcription Duodenum Mucosa Duodenum
3 chr5:49697000-49723400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
4 chr5:49697400-49723400 Weak transcription HSMM muscle
5 chr5:49697600-49719000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr5:49697600-49721600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
7 chr5:49703200-49719000 Weak transcription HMEC breast
8 chr5:49703200-49724600 Weak transcription Primary hematopoietic stem cells blood
9 chr5:49703200-49727000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr5:49712200-49718200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr5:49712200-49718600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
12 chr5:49713000-49719600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
13 chr5:49713000-49722000 Weak transcription Primary T cells fromperipheralblood blood
14 chr5:49713000-49722600 Weak transcription Fetal Thymus thymus
15 chr5:49713000-49725800 Weak transcription Small Intestine intestine
16 chr5:49714600-49718800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr5:49714800-49721200 Weak transcription Primary T cells from cord blood blood
18 chr5:49715000-49718600 Weak transcription Primary T helper cells fromperipheralblood blood
19 chr5:49715000-49722600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
20 chr5:49715000-49723400 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr5:49715000-49723800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
22 chr5:49716600-49718400 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr5:49716600-49720400 Weak transcription Primary B cells from peripheral blood blood
24 chr5:49716600-49722000 Weak transcription Primary monocytes fromperipheralblood blood
25 chr5:49716800-49718200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr5:49716800-49718800 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr5:49716800-49720200 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr5:49717000-49718200 Weak transcription Primary B cells from cord blood blood
29 chr5:49717000-49718200 Weak transcription Monocytes-CD14+_RO01746 blood
30 chr5:49717000-49719800 Weak transcription Primary neutrophils fromperipheralblood blood
31 chr5:49717000-49723600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr5:49717200-49722000 Weak transcription HUES64 Cell Line embryonic stem cell
33 chr5:49717800-49723800 Strong transcription Dnd41 blood
34 chr5:49718000-49719200 Enhancers Primary T helper cells PMA-I stimulated --
35 chr5:49718000-49719400 Enhancers Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015