Variant report

Variant rs58760240
Chromosome Location chr5:96437763-96437764
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:96428400-96440000 Weak transcription K562 blood
2 chr5:96430600-96438000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr5:96430800-96438200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:96432600-96439200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr5:96432800-96439000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr5:96432800-96445600 Weak transcription Primary B cells from cord blood blood
7 chr5:96434200-96438600 Enhancers Cortex derived primary cultured neurospheres brain
8 chr5:96434600-96439200 Enhancers Brain Cingulate Gyrus brain
9 chr5:96435000-96447400 Weak transcription Fetal Muscle Leg muscle
10 chr5:96436200-96438200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr5:96436200-96438400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr5:96436200-96438400 Enhancers Brain Germinal Matrix brain
13 chr5:96436200-96438400 Enhancers Brain Substantia Nigra brain
14 chr5:96436400-96438200 Enhancers Fetal Stomach stomach
15 chr5:96436400-96438200 Enhancers Stomach Smooth Muscle stomach
16 chr5:96436400-96438400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
17 chr5:96437000-96438000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr5:96437000-96438000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
19 chr5:96437000-96438000 Enhancers Colon Smooth Muscle Colon
20 chr5:96437000-96438200 Enhancers H1 Cell Line embryonic stem cell
21 chr5:96437000-96438200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr5:96437000-96438200 Enhancers HUES6 Cell Line embryonic stem cell
23 chr5:96437000-96438200 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
24 chr5:96437000-96438200 Enhancers NH-A brain
25 chr5:96437000-96438600 Enhancers iPS-20b Cell Line embryonic stem cell
26 chr5:96437000-96439200 Enhancers HUES48 Cell Line embryonic stem cell
27 chr5:96437000-96439200 Enhancers HUES64 Cell Line embryonic stem cell
28 chr5:96437000-96439200 Enhancers iPS-15b Cell Line embryonic stem cell
29 chr5:96437200-96438000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr5:96437200-96439000 Enhancers iPS-18 Cell Line embryonic stem cell
31 chr5:96437200-96441400 Strong transcription Primary B cells from peripheral blood blood
32 chr5:96437400-96438200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
33 chr5:96437400-96438400 Enhancers ES-I3 Cell Line embryonic stem cell
34 chr5:96437400-96439200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
35 chr5:96437600-96437800 Flanking Active TSS Brain Angular Gyrus brain
36 chr5:96437600-96437800 Flanking Active TSS Brain Hippocampus Middle brain
37 chr5:96437600-96437800 Flanking Active TSS Brain Inferior Temporal Lobe brain
38 chr5:96437600-96438000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
39 chr5:96437600-96438000 Flanking Active TSS Brain Anterior Caudate brain
40 chr5:96437600-96438200 Enhancers H9 Cell Line embryonic stem cell
41 chr5:96437600-96438200 Enhancers Breast Myoepithelial Primary Cells Breast
42 chr5:96437600-96441800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived

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