Variant report
| Variant | rs6556946 |
|---|---|
| Chromosome Location | chr5:96442569-96442570 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:96432800-96445600 | Weak transcription | Primary B cells from cord blood | blood |
| 2 | chr5:96435000-96447400 | Weak transcription | Fetal Muscle Leg | muscle |
| 3 | chr5:96438400-96443600 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 4 | chr5:96438600-96454800 | Weak transcription | Brain Hippocampus Middle | brain |
| 5 | chr5:96440000-96443200 | Strong transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 6 | chr5:96440800-96443400 | Enhancers | Fetal Intestine Large | intestine |
| 7 | chr5:96440800-96448600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 8 | chr5:96441200-96443200 | Enhancers | Fetal Intestine Small | intestine |
| 9 | chr5:96441400-96442600 | Enhancers | Duodenum Mucosa | Duodenum |
| 10 | chr5:96441400-96443800 | Weak transcription | Primary B cells from peripheral blood | blood |
| 11 | chr5:96441400-96448600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 12 | chr5:96441800-96442600 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 13 | chr5:96441800-96447200 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 14 | chr5:96442000-96443000 | Enhancers | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 15 | chr5:96442400-96442800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 16 | chr5:96442400-96460200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
