Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr14:81030392..81031930-chr14:81036761..81039029,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs12434405	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs12434618	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs12435900	0.88[AMR][1000 genomes]
rs17110752	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs17110796	0.86[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs17110799	0.86[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs17110803	0.86[AMR][1000 genomes];0.84[ASN][1000 genomes]
rs17110815	0.82[EUR][1000 genomes]
rs17110880	0.85[EUR][1000 genomes]
rs2122429	0.82[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs56341421	0.86[AMR][1000 genomes];0.95[ASN][1000 genomes]
rs7160951	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72689053	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs72689058	0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs72689070	0.83[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs72689071	0.83[AMR][1000 genomes];0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72689095	0.85[EUR][1000 genomes]
rs8008191	0.83[EUR][1000 genomes]
rs8013010	0.85[AMR][1000 genomes]
rs8017017	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8017133	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs8017609	0.87[EUR][1000 genomes]
rs8017722	0.86[EUR][1000 genomes];0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv869348	chr14:80921098-81535754	Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	nsv902116	chr14:81018237-81082400	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:81028400-81033400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr14:81029600-81044800	Weak transcription	Dnd41	blood
3	chr14:81031000-81032000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr14:81031000-81032000	Enhancers	Placenta	Placenta
5	chr14:81031400-81032000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr14:81031400-81032000	Enhancers	H9 Cell Line	embryonic stem cell
7	chr14:81031400-81032200	Enhancers	iPS-20b Cell Line	embryonic stem cell
8	chr14:81031400-81032400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
9	chr14:81031600-81032000	Enhancers	HUES6 Cell Line	embryonic stem cell
10	chr14:81031600-81032400	Enhancers	HUES48 Cell Line	embryonic stem cell
11	chr14:81031600-81032600	Enhancers	iPS-18 Cell Line	embryonic stem cell
12	chr14:81031800-81032000	Enhancers	Placenta Amnion	Placenta Amnion
13	chr14:81031800-81032400	Enhancers	iPS-15b Cell Line	embryonic stem cell

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